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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183640203
OQVL01002032
95987
Bacteroidota
CAA
Leu
>WENV183640122
OQVL01001348
339412
Bacteroidota
GGT
Thr
>WENV183640149
OQVL01001489
267954
Bacteroidota
GCC
Gly
>WENV183640408
OQVL01004065
267954
Bacteroidota
GCC
Gly
>WENV183640261
OQVL01002487
237796
Bacteroidota
CGT
Thr
>WENV183640322
OQVL01003103
237796
Bacteroidota
CGT
Thr
>WENV183640115
OQVL01001272
136244
Bacteroidota
TAC
Val
>WENV183640215
OQVL01002180
136244
Bacteroidota
TAC
Val
>WENV183640661
OQVL01008241
136244
Bacteroidota
TAC
Val
>WENV183641888
OQVL01097671
237797
Bacteroidota
CCA
Trp
>WENV183641891
OQVL01097822
179643
Bacteroidota
GTC
Asp
>WENV183641679
OQVL01064117
144695
Bacteroidota
CAT
Met
>WENV183641121
OQVL01020823
412479
Bacteroidota
TTG
Gln
>WENV183641776
OQVL01076368
155123
Bacteroidota
GTT
Asn
>WENV183641990
OQVL01119270
145504
Bacteroidota
TGT
Thr
>WENV183640096
OQVL01001175
235203
Bacteroidota
TTT
Lys
>WENV183639937
OQVL01000369
193809
Bacteroidota
CAT
Met
>WENV183640102
OQVL01001194
37076
Bacteroidota
TAA
Leu
>WENV183640328
OQVL01003146
251266
Bacteroidota
CTT
Lys
>WENV183641356
OQVL01033318
53439
Bacteroidota
TGA
Ser
>WENV183640382
OQVL01003722
136207
Bacteroidota
TAC
Val
>WENV183641904
OQVL01100068
171336
Bacteroidota
GGC
Ala
>WENV183640827
OQVL01011701
344769
Bacteroidota
CTC
Glu
>WENV183640311
OQVL01002984
415558
Bacteroidota
TTG
Gln
>WENV183640884
OQVL01013219
415558
Bacteroidota
TTG
Gln
>WENV183641248
OQVL01026469
175704
Bacteroidota
TGC
Ala
>WENV183639927
OQVL01000322
419272
Bacteroidota
CTG
Gln
>WENV183640129
OQVL01001358
139743
Bacteroidota
GGG
Pro
>WENV183641772
OQVL01075755
147439
Bacteroidota
TCT
Arg
>WENV183640600
OQVL01006874
196394
Bacteroidota
GTC
Asp
>WENV183640778
OQVL01010638
196394
Bacteroidota
GTC
Asp
>WENV183639852
OQVL01000045
353927
Bacteroidota
TTC
Glu
>WENV183641614
OQVL01057031
353927
Bacteroidota
TTC
Glu
>WENV183641094
OQVL01019596
412236
Bacteroidota
CCC
Gly
>WENV183640573
OQVL01006654
96124
Bacteroidota
TAG
Leu
>WENV183640189
OQVL01001897
313363
Bacteroidota
GAA
Phe
>WENV183640210
OQVL01002064
313363
Bacteroidota
GAA
Phe
>WENV183640448
OQVL01004564
313363
Bacteroidota
GAA
Phe
>WENV183641119
OQVL01020647
313363
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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