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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183644388
OQVP01012607
24650
Bacillota
TAA
Leu
>WENV183644471
OQVP01018495
158247
Bacillota
>WENV183644609
OQVP01033989
156189
Bacillota
GAT
Ile
>WENV183644469
OQVP01018425
235098
Bacillota
GAC
Val
>WENV183644620
OQVP01035521
44854
Bacillota
TGA
Ser
>WENV183644652
OQVP01040075
144577
Bacillota
GAT
Ile
>WENV183644381
OQVP01012402
59312
Bacillota
CAG
Leu
>WENV183643976
OQVP01001712
338147
Bacillota
CTC
Glu
>WENV183644567
OQVP01028268
338147
Bacillota
CTC
Glu
>WENV183644280
OQVP01007989
235294
Bacillota
TGC
Ala
>WENV183644409
OQVP01014101
151717
Bacillota
CAT
Met
>WENV183644395
OQVP01012946
235114
Bacillota
TTT
Lys
>WENV183644336
OQVP01010294
144668
Bacillota
GTC
Asp
>WENV183644005
OQVP01002098
235091
Bacillota
CTT
Lys
>WENV183644251
OQVP01006943
148104
Bacillota
CAT
Met
>WENV183644442
OQVP01016549
44859
Bacillota
AAG
Leu
>WENV183644683
OQVP01046174
235117
Bacillota
TAC
Val
>WENV183644102
OQVP01003701
239076
Bacillota
GAA
Phe
>WENV183644674
OQVP01044799
247057
Bacillota
TGC
Ala
>WENV183643780
OQVP01000200
156937
Bacillota
GTG
His
>WENV183644651
OQVP01040075
235087
Bacillota
TGC
Ala
>WENV183644444
OQVP01016562
81382
Bacillota
GAG
Leu
>WENV183644004
OQVP01002098
338149
Bacillota
CTC
Glu
>WENV183644525
OQVP01022598
245298
Bacillota
CGG
Pro
>WENV183644001
OQVP01002095
37269
Bacillota
TGA
Ser
>WENV183644561
OQVP01027346
37269
Bacillota
TGA
Ser
>WENV183644387
OQVP01012565
341796
Bacillota
CCG
Arg
>WENV183644760
OQVP01068574
413152
Bacillota
TCC
Gly
>WENV183643951
OQVP01001262
235078
Bacillota
TAC
Val
>WENV183644538
OQVP01025396
153911
Bacillota
GAT
Ile
>WENV183643952
OQVP01001262
240017
Bacillota
GCC
Gly
>WENV183644524
OQVP01022598
411547
Bacillota
CTG
Gln
>WENV183644621
OQVP01035521
4624
Bacillota
GCT
Ser
>WENV183644526
OQVP01022680
412387
Bacillota
GCA
Cys
>WENV183644190
OQVP01005384
248683
Bacillota
TTT
Lys
>WENV183644685
OQVP01046174
235095
Bacillota
GGT
Thr
>WENV183644030
OQVP01002447
241471
Bacillota
TGC
Ala
>WENV183644703
OQVP01051614
411549
Bacillota
TTG
Gln
>WENV183644286
OQVP01008257
235142
Bacillota
CTT
Lys
>WENV183644425
OQVP01015337
148188
Bacillota
CCG
Arg
>WENV183644434
OQVP01016110
235124
Bacillota
TGG
Pro
>WENV183644416
OQVP01014645
338129
Bacillota
TGT
Thr
>WENV183644133
OQVP01004113
157838
Bacillota
GTC
Asp
>WENV183644689
OQVP01046552
144583
Bacillota
ACG
Arg
>WENV183644542
OQVP01025562
247734
Bacillota
TGC
Ala
>WENV183643966
OQVP01001427
127572
Bacillota
ACG
Arg
>WENV183644320
OQVP01009813
144621
Bacillota
GTT
Asn
>WENV183644076
OQVP01003326
243098
Bacillota
GGT
Thr
>WENV183644159
OQVP01004671
58712
Bacillota
CAG
Leu
>WENV183644149
OQVP01004476
344240
Bacillota
GCC
Gly
>WENV183644637
OQVP01038835
144594
Bacillota
CAC
Val
>WENV183644300
OQVP01008841
95563
Bacillota
GTA
Tyr
>WENV183644199
OQVP01005670
114075
Bacillota
TAG
Leu
>WENV183644518
OQVP01021738
238945
Bacillota
GCC
Gly
>WENV183644506
OQVP01020841
338128
Bacillota
TTC
Glu
>WENV183644148
OQVP01004476
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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