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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183653483
OQVZ01034448
155958
Bacillota
GAT
Ile
>WENV183653559
OQVZ01048625
235134
Bacillota
GAA
Phe
>WENV183653629
OQVZ01067422
156189
Bacillota
GAT
Ile
>WENV183653420
OQVZ01023186
235098
Bacillota
GAC
Val
>WENV183653585
OQVZ01053501
44854
Bacillota
TGA
Ser
>WENV183653459
OQVZ01031101
59312
Bacillota
CAG
Leu
>WENV183652847
OQVZ01000309
155273
Bacillota
CAT
Met
>WENV183653302
OQVZ01013169
340802
Bacillota
TTG
Gln
>WENV183652748
OQVZ01000009
356658
Bacillota
TTC
Glu
>WENV183653350
OQVZ01016523
144668
Bacillota
GTC
Asp
>WENV183653065
OQVZ01002539
235091
Bacillota
CTT
Lys
>WENV183653323
OQVZ01014602
44859
Bacillota
AAG
Leu
>WENV183653443
OQVZ01027126
44859
Bacillota
AAG
Leu
>WENV183653156
OQVZ01005452
11034
Bacillota
GGA
Ser
>WENV183653256
OQVZ01010793
247057
Bacillota
TGC
Ala
>WENV183653534
OQVZ01043635
235087
Bacillota
TGC
Ala
>WENV183653524
OQVZ01042018
152513
Bacillota
GAC
Val
>WENV183653064
OQVZ01002539
338149
Bacillota
CTC
Glu
>WENV183653261
OQVZ01011049
245298
Bacillota
CGG
Pro
>WENV183653454
OQVZ01029378
37269
Bacillota
TGA
Ser
>WENV183653529
OQVZ01042808
153911
Bacillota
GAT
Ile
>WENV183653301
OQVZ01013169
144610
Bacillota
GTG
His
>WENV183653560
OQVZ01048625
240017
Bacillota
GCC
Gly
>WENV183653260
OQVZ01011049
411547
Bacillota
CTG
Gln
>WENV183653600
OQVZ01058346
147684
Bacillota
ACG
Arg
>WENV183653586
OQVZ01053501
4624
Bacillota
GCT
Ser
>WENV183652886
OQVZ01000622
248683
Bacillota
TTT
Lys
>WENV183653346
OQVZ01016435
248683
Bacillota
TTT
Lys
>WENV183653487
OQVZ01035284
243399
Bacillota
CCA
Trp
>WENV183653384
OQVZ01019131
235095
Bacillota
GGT
Thr
>WENV183653393
OQVZ01020180
235095
Bacillota
GGT
Thr
>WENV183653480
OQVZ01034325
344183
Bacillota
CTG
Gln
>WENV183653186
OQVZ01006916
419639
Bacillota
GCA
Cys
>WENV183653162
OQVZ01005628
411549
Bacillota
TTG
Gln
>WENV183653092
OQVZ01002974
245386
Bacillota
CCA
Trp
>WENV183653558
OQVZ01048517
148188
Bacillota
CCG
Arg
>WENV183653225
OQVZ01009081
80612
Bacillota
GTA
Tyr
>WENV183653488
OQVZ01035284
152051
Bacillota
ACG
Arg
>WENV183653087
OQVZ01002922
163943
Bacillota
GTC
Asp
>WENV183653151
OQVZ01005369
235124
Bacillota
TGG
Pro
>WENV183653413
OQVZ01022311
144583
Bacillota
ACG
Arg
>WENV183653010
OQVZ01001606
236037
Bacillota
GTG
His
>WENV183653336
OQVZ01016168
247734
Bacillota
TGC
Ala
>WENV183653194
OQVZ01006986
419877
Bacillota
TCC
Gly
>WENV183653432
OQVZ01025918
235171
Bacillota
CCA
Trp
>WENV183653254
OQVZ01010622
144621
Bacillota
GTT
Asn
>WENV183652856
OQVZ01000349
243098
Bacillota
GGT
Thr
>WENV183652960
OQVZ01001185
58712
Bacillota
CAG
Leu
>WENV183653357
OQVZ01017096
245296
Bacillota
CCC
Gly
>WENV183652951
OQVZ01001079
344240
Bacillota
GCC
Gly
>WENV183652887
OQVZ01000630
248965
Bacillota
GCC
Gly
>WENV183653300
OQVZ01013169
157635
Bacillota
TCT
Arg
>WENV183653197
OQVZ01007138
144594
Bacillota
CAC
Val
>WENV183653374
OQVZ01018655
238945
Bacillota
GCC
Gly
>WENV183652867
OQVZ01000405
338128
Bacillota
TTC
Glu
>WENV183652976
OQVZ01001330
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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