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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
209 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183751740
PPYE01029953
119661
Verrucomicrobiota
CAA
Leu
>WENV183754205
PPYE01090261
119661
Verrucomicrobiota
CAA
Leu
>WENV183763800
PPYE01311095
119661
Verrucomicrobiota
CAA
Leu
>WENV183764248
PPYE01319594
119661
Verrucomicrobiota
CAA
Leu
>WENV183771020
PPYE01453351
119661
Verrucomicrobiota
CAA
Leu
>WENV183751773
PPYE01029976
155256
Verrucomicrobiota
TCT
Arg
>WENV183754206
PPYE01090262
155256
Verrucomicrobiota
TCT
Arg
>WENV183763809
PPYE01311097
155256
Verrucomicrobiota
TCT
Arg
>WENV183764728
PPYE01320678
155256
Verrucomicrobiota
TCT
Arg
>WENV183770901
PPYE01453253
155256
Verrucomicrobiota
TCT
Arg
>WENV183751774
PPYE01029977
246701
Verrucomicrobiota
TTT
Lys
>WENV183754341
PPYE01090579
246701
Verrucomicrobiota
TTT
Lys
>WENV183763845
PPYE01311118
246701
Verrucomicrobiota
TTT
Lys
>WENV183764449
PPYE01319764
246701
Verrucomicrobiota
TTT
Lys
>WENV183770909
PPYE01453257
246701
Verrucomicrobiota
TTT
Lys
>WENV183751975
PPYE01030355
345141
Verrucomicrobiota
TTG
Gln
>WENV183754387
PPYE01090752
345141
Verrucomicrobiota
TTG
Gln
>WENV183763791
PPYE01311093
345141
Verrucomicrobiota
TTG
Gln
>WENV183764596
PPYE01320146
345141
Verrucomicrobiota
TTG
Gln
>WENV183770936
PPYE01453274
345141
Verrucomicrobiota
TTG
Gln
>WENV183751735
PPYE01029949
345133
Verrucomicrobiota
GAC
Val
>WENV183754516
PPYE01092247
345133
Verrucomicrobiota
GAC
Val
>WENV183763793
PPYE01311093
345133
Verrucomicrobiota
GAC
Val
>WENV183764332
PPYE01319650
345133
Verrucomicrobiota
GAC
Val
>WENV183771079
PPYE01453445
345133
Verrucomicrobiota
GAC
Val
>WENV183751763
PPYE01029970
82054
Verrucomicrobiota
GTA
Tyr
>WENV183754222
PPYE01090275
82054
Verrucomicrobiota
GTA
Tyr
>WENV183763975
PPYE01311391
82054
Verrucomicrobiota
GTA
Tyr
>WENV183764472
PPYE01319793
82054
Verrucomicrobiota
GTA
Tyr
>WENV183771002
PPYE01453335
82054
Verrucomicrobiota
GTA
Tyr
>WENV183751797
PPYE01030007
246677
Verrucomicrobiota
CTT
Lys
>WENV183751798
PPYE01030007
246677
Verrucomicrobiota
CTT
Lys
>WENV183754424
PPYE01090962
246677
Verrucomicrobiota
CTT
Lys
>WENV183754425
PPYE01090962
246677
Verrucomicrobiota
CTT
Lys
>WENV183763848
PPYE01311124
246677
Verrucomicrobiota
CTT
Lys
>WENV183763849
PPYE01311124
246677
Verrucomicrobiota
CTT
Lys
>WENV183764733
PPYE01320703
246677
Verrucomicrobiota
CTT
Lys
>WENV183764734
PPYE01320703
246677
Verrucomicrobiota
CTT
Lys
>WENV183771082
PPYE01453448
246677
Verrucomicrobiota
CTT
Lys
>WENV183771083
PPYE01453448
246677
Verrucomicrobiota
CTT
Lys
>WENV183751829
PPYE01030036
344844
Verrucomicrobiota
GCA
Cys
>WENV183754276
PPYE01090385
344844
Verrucomicrobiota
GCA
Cys
>WENV183763862
PPYE01311150
344844
Verrucomicrobiota
GCA
Cys
>WENV183764460
PPYE01319778
344844
Verrucomicrobiota
GCA
Cys
>WENV183771369
PPYE01455556
344844
Verrucomicrobiota
GCA
Cys
>WENV183752057
PPYE01030681
155264
Verrucomicrobiota
GGG
Pro
>WENV183754259
PPYE01090343
155264
Verrucomicrobiota
GGG
Pro
>WENV183763802
PPYE01311095
155264
Verrucomicrobiota
GGG
Pro
>WENV183764312
PPYE01319639
155264
Verrucomicrobiota
GGG
Pro
>WENV183771029
PPYE01453370
155264
Verrucomicrobiota
GGG
Pro
>WENV183751935
PPYE01030230
344845
Verrucomicrobiota
CTG
Gln
>WENV183754203
PPYE01090257
344845
Verrucomicrobiota
CTG
Gln
>WENV183763792
PPYE01311093
344845
Verrucomicrobiota
CTG
Gln
>WENV183764499
PPYE01319860
344845
Verrucomicrobiota
CTG
Gln
>WENV183771078
PPYE01453445
344845
Verrucomicrobiota
CTG
Gln
>WENV183751734
PPYE01029949
128202
Verrucomicrobiota
GTC
Asp
>WENV183754419
PPYE01090921
128202
Verrucomicrobiota
GTC
Asp
>WENV183754511
PPYE01092129
128202
Verrucomicrobiota
GTC
Asp
>WENV183763787
PPYE01311093
128202
Verrucomicrobiota
GTC
Asp
>WENV183764422
PPYE01319738
128202
Verrucomicrobiota
GTC
Asp
>WENV183764498
PPYE01319860
128202
Verrucomicrobiota
GTC
Asp
>WENV183751779
PPYE01029982
414625
Verrucomicrobiota
CCC
Gly
>WENV183754193
PPYE01090245
414625
Verrucomicrobiota
CCC
Gly
>WENV183763894
PPYE01311194
414625
Verrucomicrobiota
CCC
Gly
>WENV183764577
PPYE01320077
414625
Verrucomicrobiota
CCC
Gly
>WENV183771010
PPYE01453345
414625
Verrucomicrobiota
CCC
Gly
>WENV183751789
PPYE01030004
46246
Verrucomicrobiota
TGA
Ser
>WENV183754340
PPYE01090574
46246
Verrucomicrobiota
TGA
Ser
>WENV183763866
PPYE01311152
46246
Verrucomicrobiota
TGA
Ser
>WENV183764391
PPYE01319697
46246
Verrucomicrobiota
TGA
Ser
>WENV183771026
PPYE01453367
46246
Verrucomicrobiota
TGA
Ser
>WENV183752105
PPYE01030995
97755
Verrucomicrobiota
TAG
Leu
>WENV183754258
PPYE01090338
97755
Verrucomicrobiota
TAG
Leu
>WENV183763801
PPYE01311095
97755
Verrucomicrobiota
TAG
Leu
>WENV183770930
PPYE01453266
97755
Verrucomicrobiota
TAG
Leu
>WENV183751825
PPYE01030036
246700
Verrucomicrobiota
TTC
Glu
>WENV183751830
PPYE01030036
246700
Verrucomicrobiota
TTC
Glu
>WENV183754277
PPYE01090385
246700
Verrucomicrobiota
TTC
Glu
>WENV183754311
PPYE01090478
246700
Verrucomicrobiota
TTC
Glu
>WENV183763863
PPYE01311150
246700
Verrucomicrobiota
TTC
Glu
>WENV183763868
PPYE01311152
246700
Verrucomicrobiota
TTC
Glu
>WENV183764461
PPYE01319778
246700
Verrucomicrobiota
TTC
Glu
>WENV183764512
PPYE01319908
246700
Verrucomicrobiota
TTC
Glu
>WENV183770956
PPYE01453291
246700
Verrucomicrobiota
TTC
Glu
>WENV183770959
PPYE01453291
246700
Verrucomicrobiota
TTC
Glu
>WENV183771307
PPYE01454750
246700
Verrucomicrobiota
TTC
Glu
>WENV183763790
PPYE01311093
347038
Verrucomicrobiota
GCC
Gly
>WENV183764511
PPYE01319908
347038
Verrucomicrobiota
GCC
Gly
>WENV183764829
PPYE01321460
347038
Verrucomicrobiota
GCC
Gly
>WENV183771128
PPYE01453651
347038
Verrucomicrobiota
GCC
Gly
>WENV183751869
PPYE01030092
246687
Verrucomicrobiota
CGC
Ala
>WENV183754257
PPYE01090332
246687
Verrucomicrobiota
CGC
Ala
>WENV183763865
PPYE01311150
246687
Verrucomicrobiota
CGC
Ala
>WENV183764371
PPYE01319676
246687
Verrucomicrobiota
CGC
Ala
>WENV183770958
PPYE01453291
246687
Verrucomicrobiota
CGC
Ala
>WENV183751776
PPYE01029982
419909
Verrucomicrobiota
TCC
Gly
>WENV183754192
PPYE01090245
419909
Verrucomicrobiota
TCC
Gly
>WENV183763893
PPYE01311194
419909
Verrucomicrobiota
TCC
Gly
>WENV183771007
PPYE01453345
419909
Verrucomicrobiota
TCC
Gly
>WENV183751868
PPYE01030089
344841
Verrucomicrobiota
CAC
Val
>WENV183754528
PPYE01092376
344841
Verrucomicrobiota
CAC
Val
>WENV183763789
PPYE01311093
344841
Verrucomicrobiota
CAC
Val
>WENV183764463
PPYE01319780
344841
Verrucomicrobiota
CAC
Val
>WENV183771034
PPYE01453379
344841
Verrucomicrobiota
CAC
Val
>WENV183752007
PPYE01030438
60880
Verrucomicrobiota
CAG
Leu
>WENV183764014
PPYE01311778
60880
Verrucomicrobiota
CAG
Leu
>WENV183764392
PPYE01319698
60880
Verrucomicrobiota
CAG
Leu
>WENV183771263
PPYE01454429
60880
Verrucomicrobiota
CAG
Leu
>WENV183751736
PPYE01029953
82056
Verrucomicrobiota
TAA
Leu
>WENV183754310
PPYE01090474
82056
Verrucomicrobiota
TAA
Leu
>WENV183763806
PPYE01311095
82056
Verrucomicrobiota
TAA
Leu
>WENV183764418
PPYE01319734
82056
Verrucomicrobiota
TAA
Leu
>WENV183771107
PPYE01453547
82056
Verrucomicrobiota
TAA
Leu
>WENV183751796
PPYE01030007
344842
Verrucomicrobiota
CGT
Thr
>WENV183754423
PPYE01090962
344842
Verrucomicrobiota
CGT
Thr
>WENV183763847
PPYE01311124
344842
Verrucomicrobiota
CGT
Thr
>WENV183764732
PPYE01320703
344842
Verrucomicrobiota
CGT
Thr
>WENV183771081
PPYE01453448
344842
Verrucomicrobiota
CGT
Thr
>WENV183752000
PPYE01030380
170105
Verrucomicrobiota
CAT
Met
>WENV183754248
PPYE01090322
170105
Verrucomicrobiota
CAT
Met
>WENV183763912
PPYE01311208
170105
Verrucomicrobiota
CAT
Met
>WENV183764329
PPYE01319647
170105
Verrucomicrobiota
CAT
Met
>WENV183771137
PPYE01453744
170105
Verrucomicrobiota
CAT
Met
>WENV183751766
PPYE01029973
287733
Verrucomicrobiota
CCA
Trp
>WENV183763858
PPYE01311134
287733
Verrucomicrobiota
CCA
Trp
>WENV183764501
PPYE01319864
287733
Verrucomicrobiota
CCA
Trp
>WENV183770961
PPYE01453292
287733
Verrucomicrobiota
CCA
Trp
>WENV183751870
PPYE01030094
345123
Verrucomicrobiota
TGT
Thr
>WENV183763864
PPYE01311150
345123
Verrucomicrobiota
TGT
Thr
>WENV183764370
PPYE01319676
345123
Verrucomicrobiota
TGT
Thr
>WENV183770957
PPYE01453291
345123
Verrucomicrobiota
TGT
Thr
>WENV183751852
PPYE01030056
345110
Verrucomicrobiota
CCT
Arg
>WENV183754439
PPYE01091141
345110
Verrucomicrobiota
CCT
Arg
>WENV183763805
PPYE01311095
345110
Verrucomicrobiota
CCT
Arg
>WENV183764496
PPYE01319854
345110
Verrucomicrobiota
CCT
Arg
>WENV183771151
PPYE01453792
345110
Verrucomicrobiota
CCT
Arg
>WENV183751826
PPYE01030036
344839
Verrucomicrobiota
GTG
His
>WENV183763869
PPYE01311152
344839
Verrucomicrobiota
GTG
His
>WENV183764513
PPYE01319908
344839
Verrucomicrobiota
GTG
His
>WENV183771443
PPYE01456454
344839
Verrucomicrobiota
GTG
His
>WENV183751846
PPYE01030047
7274
Verrucomicrobiota
CGA
Ser
>WENV183763886
PPYE01311179
7274
Verrucomicrobiota
CGA
Ser
>WENV183764443
PPYE01319752
7274
Verrucomicrobiota
CGA
Ser
>WENV183771021
PPYE01453355
7274
Verrucomicrobiota
CGA
Ser
>WENV183751737
PPYE01029953
246260
Verrucomicrobiota
>WENV183763807
PPYE01311095
246260
Verrucomicrobiota
>WENV183764419
PPYE01319734
246260
Verrucomicrobiota
>WENV183771108
PPYE01453547
246260
Verrucomicrobiota
>WENV183751795
PPYE01030007
155268
Verrucomicrobiota
CGG
Pro
>WENV183754411
PPYE01090869
155268
Verrucomicrobiota
CGG
Pro
>WENV183763846
PPYE01311124
155268
Verrucomicrobiota
CGG
Pro
>WENV183764731
PPYE01320703
155268
Verrucomicrobiota
CGG
Pro
>WENV183771080
PPYE01453448
155268
Verrucomicrobiota
CGG
Pro
>WENV183751828
PPYE01030036
82181
Verrucomicrobiota
AAG
Leu
>WENV183763861
PPYE01311150
82181
Verrucomicrobiota
AAG
Leu
>WENV183771037
PPYE01453383
82181
Verrucomicrobiota
AAG
Leu
>WENV183751777
PPYE01029982
246728
Verrucomicrobiota
GAA
Phe
>WENV183754521
PPYE01092310
246728
Verrucomicrobiota
GAA
Phe
>WENV183763803
PPYE01311095
246728
Verrucomicrobiota
GAA
Phe
>WENV183764310
PPYE01319639
246728
Verrucomicrobiota
GAA
Phe
>WENV183771008
PPYE01453345
246728
Verrucomicrobiota
GAA
Phe
>WENV183751738
PPYE01029953
7256
Verrucomicrobiota
GCT
Ser
>WENV183754389
PPYE01090752
7256
Verrucomicrobiota
GCT
Ser
>WENV183763808
PPYE01311095
7256
Verrucomicrobiota
GCT
Ser
>WENV183764420
PPYE01319734
7256
Verrucomicrobiota
GCT
Ser
>WENV183771109
PPYE01453547
7256
Verrucomicrobiota
GCT
Ser
>WENV183751791
PPYE01030004
345115
Verrucomicrobiota
CAT
Met
>WENV183754349
PPYE01090604
345115
Verrucomicrobiota
CAT
Met
>WENV183763871
PPYE01311152
345115
Verrucomicrobiota
CAT
Met
>WENV183764650
PPYE01320327
345115
Verrucomicrobiota
CAT
Met
>WENV183771025
PPYE01453367
345115
Verrucomicrobiota
CAT
Met
>WENV183751733
PPYE01029949
345119
Verrucomicrobiota
TAC
Val
>WENV183763786
PPYE01311093
345119
Verrucomicrobiota
TAC
Val
>WENV183764522
PPYE01319927
345119
Verrucomicrobiota
TAC
Val
>WENV183771222
PPYE01454198
345119
Verrucomicrobiota
TAC
Val
>WENV183751762
PPYE01029970
345124
Verrucomicrobiota
GTT
Asn
>WENV183754221
PPYE01090275
345124
Verrucomicrobiota
GTT
Asn
>WENV183763974
PPYE01311391
345124
Verrucomicrobiota
GTT
Asn
>WENV183764664
PPYE01320341
345124
Verrucomicrobiota
GTT
Asn
>WENV183771001
PPYE01453335
345124
Verrucomicrobiota
GTT
Asn
>WENV183751831
PPYE01030037
17023
Verrucomicrobiota
GGA
Ser
>WENV183763872
PPYE01311153
17023
Verrucomicrobiota
GGA
Ser
>WENV183770992
PPYE01453320
17023
Verrucomicrobiota
GGA
Ser
>WENV183754204
PPYE01090261
368497
Verrucomicrobiota
GCC
Gly
>WENV183754434
PPYE01091077
368497
Verrucomicrobiota
GCC
Gly
>WENV183763867
PPYE01311152
368497
Verrucomicrobiota
GCC
Gly
>WENV183771033
PPYE01453379
368497
Verrucomicrobiota
GCC
Gly
>WENV183751790
PPYE01030004
368497
Verrucomicrobiota
GCC
Gly
>WENV183751923
PPYE01030208
368497
Verrucomicrobiota
GCC
Gly
>WENV183751822
PPYE01030029
345142
Verrucomicrobiota
CCG
Arg
>WENV183754226
PPYE01090282
345142
Verrucomicrobiota
CCG
Arg
>WENV183763895
PPYE01311194
345142
Verrucomicrobiota
CCG
Arg
>WENV183764389
PPYE01319695
345142
Verrucomicrobiota
CCG
Arg
>WENV183771094
PPYE01453488
345142
Verrucomicrobiota
CCG
Arg
>WENV183751827
PPYE01030036
246709
Verrucomicrobiota
CAT
Met
>WENV183754313
PPYE01090478
246709
Verrucomicrobiota
CAT
Met
>WENV183763870
PPYE01311152
246709
Verrucomicrobiota
CAT
Met
>WENV183764514
PPYE01319908
246709
Verrucomicrobiota
CAT
Met
>WENV183771444
PPYE01456454
246709
Verrucomicrobiota
CAT
Met
>WENV183751778
PPYE01029982
154693
Verrucomicrobiota
TGG
Pro
>WENV183754522
PPYE01092310
154693
Verrucomicrobiota
TGG
Pro
>WENV183763804
PPYE01311095
154693
Verrucomicrobiota
TGG
Pro
>WENV183764311
PPYE01319639
154693
Verrucomicrobiota
TGG
Pro
>WENV183771009
PPYE01453345
154693
Verrucomicrobiota
TGG
Pro
>WENV183751765
PPYE01029973
344751
Verrucomicrobiota
GGT
Thr
>WENV183754300
PPYE01090444
344751
Verrucomicrobiota
GGT
Thr
>WENV183763857
PPYE01311134
344751
Verrucomicrobiota
GGT
Thr
>WENV183764500
PPYE01319864
344751
Verrucomicrobiota
GGT
Thr
>WENV183770960
PPYE01453292
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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