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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
65 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183803825
PVBE010878264
237493
Alphaproteobacteria
CCA
Trp
>WENV183794505
PVBE010103362
237800
Alphaproteobacteria
>WENV183810363
PVBE011476973
80917
Alphaproteobacteria
CAG
Leu
>WENV183806177
PVBE011091716
147089
Alphaproteobacteria
ACG
Arg
>WENV183794346
PVBE010088361
58865
Alphaproteobacteria
GAG
Leu
>WENV183809434
PVBE011387562
237489
Alphaproteobacteria
CAT
Met
>WENV183808044
PVBE011257446
267922
Alphaproteobacteria
CCA
Trp
>WENV183808657
PVBE011316833
267922
Alphaproteobacteria
CCA
Trp
>WENV183809082
PVBE011354303
10665
Alphaproteobacteria
GCT
Ser
>WENV183800901
PVBE010627352
241021
Alphaproteobacteria
GGC
Ala
>WENV183807628
PVBE011215911
66752
Alphaproteobacteria
CAG
Leu
>WENV183811499
PVBE011587962
66752
Alphaproteobacteria
CAG
Leu
>WENV183793329
PVBE010004683
113700
Alphaproteobacteria
>WENV183805813
PVBE011055567
144964
Alphaproteobacteria
TGG
Pro
>WENV183807100
PVBE011170444
176908
Alphaproteobacteria
GTC
Asp
>WENV183810157
PVBE011455051
176908
Alphaproteobacteria
GTC
Asp
>WENV183804860
PVBE010966126
339724
Alphaproteobacteria
TTG
Gln
>WENV183810230
PVBE011460951
421153
Alphaproteobacteria
>WENV183793522
PVBE010021308
338282
Alphaproteobacteria
GTT
Asn
>WENV183798190
PVBE010397846
339723
Alphaproteobacteria
>WENV183798606
PVBE010432331
147083
Alphaproteobacteria
GGG
Pro
>WENV183794525
PVBE010105284
236134
Alphaproteobacteria
TAC
Val
>WENV183802775
PVBE010786120
339454
Alphaproteobacteria
>WENV183810849
PVBE011521683
339454
Alphaproteobacteria
>WENV183793809
PVBE010044102
82652
Alphaproteobacteria
GTA
Tyr
>WENV183810494
PVBE011488693
82652
Alphaproteobacteria
GTA
Tyr
>WENV183796003
PVBE010217274
148300
Alphaproteobacteria
CCA
Trp
>WENV183809610
PVBE011402694
357160
Alphaproteobacteria
TTC
Glu
>WENV183809611
PVBE011402694
357160
Alphaproteobacteria
TTC
Glu
>WENV183805455
PVBE011021284
27877
Alphaproteobacteria
GGA
Ser
>WENV183802443
PVBE010760837
351511
Alphaproteobacteria
TTG
Gln
>WENV183801975
PVBE010722426
350547
Alphaproteobacteria
GCC
Gly
>WENV183796934
PVBE010290258
252148
Alphaproteobacteria
TGT
Thr
>WENV183808723
PVBE011321711
23672
Alphaproteobacteria
GCT
Ser
>WENV183796454
PVBE010250643
167926
Alphaproteobacteria
CAT
Met
>WENV183798793
PVBE010450059
167926
Alphaproteobacteria
CAT
Met
>WENV183800246
PVBE010573643
167926
Alphaproteobacteria
CAT
Met
>WENV183801299
PVBE010664529
167926
Alphaproteobacteria
CAT
Met
>WENV183806090
PVBE011084052
167926
Alphaproteobacteria
CAT
Met
>WENV183810395
PVBE011479776
167926
Alphaproteobacteria
CAT
Met
>WENV183810401
PVBE011480597
167926
Alphaproteobacteria
CAT
Met
>WENV183811478
PVBE011586747
167926
Alphaproteobacteria
CAT
Met
>WENV183805597
PVBE011035513
161002
Alphaproteobacteria
GTG
His
>WENV183808193
PVBE011273012
242540
Alphaproteobacteria
TGC
Ala
>WENV183800613
PVBE010601797
260015
Alphaproteobacteria
CTC
Glu
>WENV183804071
PVBE010898556
260015
Alphaproteobacteria
CTC
Glu
>WENV183809146
PVBE011360005
260015
Alphaproteobacteria
CTC
Glu
>WENV183797104
PVBE010303431
348781
Alphaproteobacteria
GAA
Phe
>WENV183797637
PVBE010351439
163860
Alphaproteobacteria
GGG
Pro
>WENV183806975
PVBE011162046
412477
Alphaproteobacteria
GCA
Cys
>WENV183807489
PVBE011203811
344517
Alphaproteobacteria
GTT
Asn
>WENV183811891
PVBE011625713
339306
Alphaproteobacteria
>WENV183810614
PVBE011500176
412281
Alphaproteobacteria
CTG
Gln
>WENV183804939
PVBE010973493
266073
Alphaproteobacteria
TTT
Lys
>WENV183812020
PVBE011637928
266073
Alphaproteobacteria
TTT
Lys
>WENV183805191
PVBE010996283
152248
Alphaproteobacteria
TGG
Pro
>WENV183802489
PVBE010763041
412424
Alphaproteobacteria
TCC
Gly
>WENV183794287
PVBE010083951
150356
Alphaproteobacteria
GTC
Asp
>WENV183802412
PVBE010757426
150356
Alphaproteobacteria
GTC
Asp
>WENV183805170
PVBE010993623
150356
Alphaproteobacteria
GTC
Asp
>WENV183807596
PVBE011213155
150356
Alphaproteobacteria
GTC
Asp
>WENV183811701
PVBE011607263
150356
Alphaproteobacteria
GTC
Asp
>WENV183811806
PVBE011616715
180581
Alphaproteobacteria
TGG
Pro
>WENV183811835
PVBE011620354
236256
Alphaproteobacteria
TAC
Val
>WENV183794502
PVBE010103164
62052
Alphaproteobacteria
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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