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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
131 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183793344
PVBE010005446
45941
Cyanobacteriota
CGA
Ser
>WENV183793886
PVBE010049798
45941
Cyanobacteriota
CGA
Ser
>WENV183796641
PVBE010267401
45941
Cyanobacteriota
CGA
Ser
>WENV183798609
PVBE010432631
45941
Cyanobacteriota
CGA
Ser
>WENV183798617
PVBE010434128
45941
Cyanobacteriota
CGA
Ser
>WENV183805786
PVBE011051448
45941
Cyanobacteriota
CGA
Ser
>WENV183808332
PVBE011286655
45941
Cyanobacteriota
CGA
Ser
>WENV183810964
PVBE011532948
45941
Cyanobacteriota
CGA
Ser
>WENV183811683
PVBE011605097
45941
Cyanobacteriota
CGA
Ser
>WENV183808582
PVBE011309633
237009
Cyanobacteriota
GGC
Ala
>WENV183793649
PVBE010031644
267489
Cyanobacteriota
GGC
Ala
>WENV183796865
PVBE010284311
267489
Cyanobacteriota
GGC
Ala
>WENV183811554
PVBE011593204
267489
Cyanobacteriota
GGC
Ala
>WENV183794055
PVBE010063855
145761
Cyanobacteriota
GTC
Asp
>WENV183795546
PVBE010179566
145761
Cyanobacteriota
GTC
Asp
>WENV183798145
PVBE010393338
145761
Cyanobacteriota
GTC
Asp
>WENV183798520
PVBE010426551
145761
Cyanobacteriota
GTC
Asp
>WENV183803708
PVBE010867216
145761
Cyanobacteriota
GTC
Asp
>WENV183804714
PVBE010953170
145761
Cyanobacteriota
GTC
Asp
>WENV183806857
PVBE011151870
145761
Cyanobacteriota
GTC
Asp
>WENV183811248
PVBE011561999
164907
Cyanobacteriota
GGG
Pro
>WENV183811541
PVBE011592343
37357
Cyanobacteriota
TAA
Leu
>WENV183794887
PVBE010130972
96363
Cyanobacteriota
TAG
Leu
>WENV183807620
PVBE011214796
25356
Cyanobacteriota
GGA
Ser
>WENV183804313
PVBE010918199
349164
Cyanobacteriota
TGT
Thr
>WENV183805136
PVBE010990757
349164
Cyanobacteriota
TGT
Thr
>WENV183807081
PVBE011169436
349164
Cyanobacteriota
TGT
Thr
>WENV183808512
PVBE011302388
349164
Cyanobacteriota
TGT
Thr
>WENV183793602
PVBE010027481
338782
Cyanobacteriota
GTT
Asn
>WENV183796538
PVBE010258098
338782
Cyanobacteriota
GTT
Asn
>WENV183797207
PVBE010314417
338782
Cyanobacteriota
GTT
Asn
>WENV183798949
PVBE010460862
338782
Cyanobacteriota
GTT
Asn
>WENV183799256
PVBE010491456
338782
Cyanobacteriota
GTT
Asn
>WENV183799571
PVBE010519492
338782
Cyanobacteriota
GTT
Asn
>WENV183806463
PVBE011120662
338782
Cyanobacteriota
GTT
Asn
>WENV183806638
PVBE011134151
338782
Cyanobacteriota
GTT
Asn
>WENV183800609
PVBE010601071
363933
Cyanobacteriota
GTT
Asn
>WENV183805832
PVBE011057664
363933
Cyanobacteriota
GTT
Asn
>WENV183807991
PVBE011251138
363933
Cyanobacteriota
GTT
Asn
>WENV183811180
PVBE011554860
363933
Cyanobacteriota
GTT
Asn
>WENV183811585
PVBE011595860
363933
Cyanobacteriota
GTT
Asn
>WENV183803216
PVBE010822476
237899
Cyanobacteriota
CCA
Trp
>WENV183804713
PVBE010953170
237899
Cyanobacteriota
CCA
Trp
>WENV183812054
PVBE011640982
237899
Cyanobacteriota
CCA
Trp
>WENV183798144
PVBE010393338
237899
Cyanobacteriota
CCA
Trp
>WENV183794369
PVBE010091117
145098
Cyanobacteriota
GGG
Pro
>WENV183798399
PVBE010415845
145098
Cyanobacteriota
GGG
Pro
>WENV183809958
PVBE011434970
145098
Cyanobacteriota
GGG
Pro
>WENV183809961
PVBE011435304
145098
Cyanobacteriota
GGG
Pro
>WENV183805482
PVBE011024379
153717
Cyanobacteriota
CAT
Met
>WENV183794436
PVBE010097889
344607
Cyanobacteriota
CCC
Gly
>WENV183797419
PVBE010332736
344607
Cyanobacteriota
CCC
Gly
>WENV183797504
PVBE010339501
344607
Cyanobacteriota
CCC
Gly
>WENV183802968
PVBE010802371
344607
Cyanobacteriota
CCC
Gly
>WENV183804602
PVBE010942286
344607
Cyanobacteriota
CCC
Gly
>WENV183811192
PVBE011556352
344607
Cyanobacteriota
CCC
Gly
>WENV183804223
PVBE010910514
411836
Cyanobacteriota
TCC
Gly
>WENV183794473
PVBE010100852
58999
Cyanobacteriota
CAG
Leu
>WENV183796769
PVBE010277070
58999
Cyanobacteriota
CAG
Leu
>WENV183801910
PVBE010715659
58999
Cyanobacteriota
CAG
Leu
>WENV183803250
PVBE010827519
58999
Cyanobacteriota
CAG
Leu
>WENV183808003
PVBE011252206
58999
Cyanobacteriota
CAG
Leu
>WENV183808011
PVBE011252740
58999
Cyanobacteriota
CAG
Leu
>WENV183810123
PVBE011451646
58999
Cyanobacteriota
CAG
Leu
>WENV183799523
PVBE010513758
162346
Cyanobacteriota
GGG
Pro
>WENV183800635
PVBE010604017
162346
Cyanobacteriota
GGG
Pro
>WENV183809448
PVBE011389544
162346
Cyanobacteriota
GGG
Pro
>WENV183795962
PVBE010213852
352687
Cyanobacteriota
GAC
Val
>WENV183796173
PVBE010226115
352687
Cyanobacteriota
GAC
Val
>WENV183797851
PVBE010369624
352687
Cyanobacteriota
GAC
Val
>WENV183798220
PVBE010399981
352687
Cyanobacteriota
GAC
Val
>WENV183803027
PVBE010806925
352687
Cyanobacteriota
GAC
Val
>WENV183811062
PVBE011542420
352687
Cyanobacteriota
GAC
Val
>WENV183796768
PVBE010277070
252089
Cyanobacteriota
GTG
His
>WENV183797280
PVBE010321570
252089
Cyanobacteriota
GTG
His
>WENV183801945
PVBE010719435
252089
Cyanobacteriota
GTG
His
>WENV183802829
PVBE010791472
252089
Cyanobacteriota
GTG
His
>WENV183802903
PVBE010796459
252089
Cyanobacteriota
GTG
His
>WENV183803247
PVBE010826814
252089
Cyanobacteriota
GTG
His
>WENV183803252
PVBE010827519
252089
Cyanobacteriota
GTG
His
>WENV183803788
PVBE010875180
252089
Cyanobacteriota
GTG
His
>WENV183807773
PVBE011229965
252089
Cyanobacteriota
GTG
His
>WENV183809301
PVBE011374687
252089
Cyanobacteriota
GTG
His
>WENV183795519
PVBE010176960
148812
Cyanobacteriota
CGG
Pro
>WENV183797306
PVBE010323627
148812
Cyanobacteriota
CGG
Pro
>WENV183802135
PVBE010733034
148812
Cyanobacteriota
CGG
Pro
>WENV183806309
PVBE011104916
148812
Cyanobacteriota
CGG
Pro
>WENV183807252
PVBE011183818
148812
Cyanobacteriota
CGG
Pro
>WENV183796671
PVBE010270443
101255
Cyanobacteriota
TAG
Leu
>WENV183801325
PVBE010666429
101255
Cyanobacteriota
TAG
Leu
>WENV183802486
PVBE010762813
101255
Cyanobacteriota
TAG
Leu
>WENV183803660
PVBE010863030
101255
Cyanobacteriota
TAG
Leu
>WENV183804006
PVBE010894097
101255
Cyanobacteriota
TAG
Leu
>WENV183809752
PVBE011416631
101255
Cyanobacteriota
TAG
Leu
>WENV183810892
PVBE011525715
101255
Cyanobacteriota
TAG
Leu
>WENV183811442
PVBE011582751
101255
Cyanobacteriota
TAG
Leu
>WENV183811699
PVBE011607257
101255
Cyanobacteriota
TAG
Leu
>WENV183798953
PVBE010461342
11030
Cyanobacteriota
GCT
Ser
>WENV183799699
PVBE010530035
11030
Cyanobacteriota
GCT
Ser
>WENV183800786
PVBE010616959
11030
Cyanobacteriota
GCT
Ser
>WENV183802402
PVBE010756448
11030
Cyanobacteriota
GCT
Ser
>WENV183805144
PVBE010991605
11030
Cyanobacteriota
GCT
Ser
>WENV183793349
PVBE010005637
11030
Cyanobacteriota
GCT
Ser
>WENV183794159
PVBE010074139
153480
Cyanobacteriota
CAT
Met
>WENV183794455
PVBE010099349
153480
Cyanobacteriota
CAT
Met
>WENV183794893
PVBE010131454
153480
Cyanobacteriota
CAT
Met
>WENV183799855
PVBE010542313
153480
Cyanobacteriota
CAT
Met
>WENV183801212
PVBE010654247
153480
Cyanobacteriota
CAT
Met
>WENV183793733
PVBE010037938
240100
Cyanobacteriota
CAT
Met
>WENV183795364
PVBE010166349
158847
Cyanobacteriota
GAT
Ile
>WENV183800601
PVBE010600211
158847
Cyanobacteriota
GAT
Ile
>WENV183810852
PVBE011521998
95762
Cyanobacteriota
AAG
Leu
>WENV183801474
PVBE010678013
267488
Cyanobacteriota
CAT
Met
>WENV183811041
PVBE011540643
267488
Cyanobacteriota
CAT
Met
>WENV183796103
PVBE010223913
147238
Cyanobacteriota
CCG
Arg
>WENV183796449
PVBE010249605
147238
Cyanobacteriota
CCG
Arg
>WENV183798342
PVBE010410185
147238
Cyanobacteriota
CCG
Arg
>WENV183800389
PVBE010581625
147238
Cyanobacteriota
CCG
Arg
>WENV183800721
PVBE010612371
147238
Cyanobacteriota
CCG
Arg
>WENV183808318
PVBE011285313
147238
Cyanobacteriota
CCG
Arg
>WENV183811361
PVBE011574362
147238
Cyanobacteriota
CCG
Arg
>WENV183799302
PVBE010496205
341034
Cyanobacteriota
GGT
Thr
>WENV183800489
PVBE010589689
341034
Cyanobacteriota
GGT
Thr
>WENV183801522
PVBE010681326
341034
Cyanobacteriota
GGT
Thr
>WENV183796056
PVBE010221031
153271
Cyanobacteriota
TCT
Arg
>WENV183808755
PVBE011325007
153271
Cyanobacteriota
TCT
Arg
>WENV183812036
PVBE011639584
153271
Cyanobacteriota
TCT
Arg
>WENV183794715
PVBE010116665
145893
Cyanobacteriota
CAT
Met
>WENV183806189
PVBE011092698
145893
Cyanobacteriota
CAT
Met
>WENV183807142
PVBE011174307
275071
Cyanobacteriota
CCA
Trp
>WENV183811443
PVBE011583663
275071
Cyanobacteriota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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