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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183794124
PVBE010070324
128889
Nitrososphaerota
GAT
Ile
>WENV183796485
PVBE010253099
128889
Nitrososphaerota
GAT
Ile
>WENV183801439
PVBE010675402
128889
Nitrososphaerota
GAT
Ile
>WENV183804390
PVBE010925971
128889
Nitrososphaerota
GAT
Ile
>WENV183804393
PVBE010926221
128889
Nitrososphaerota
GAT
Ile
>WENV183810688
PVBE011506504
128889
Nitrososphaerota
GAT
Ile
>WENV183796289
PVBE010235141
351522
Nitrososphaerota
>WENV183796984
PVBE010294536
351522
Nitrososphaerota
>WENV183806011
PVBE011074940
351522
Nitrososphaerota
>WENV183793322
PVBE010004353
145604
Nitrososphaerota
TCC
Gly
>WENV183793600
PVBE010027308
145604
Nitrososphaerota
TCC
Gly
>WENV183798902
PVBE010456505
145604
Nitrososphaerota
TCC
Gly
>WENV183802348
PVBE010750755
145604
Nitrososphaerota
TCC
Gly
>WENV183802577
PVBE010770586
145604
Nitrososphaerota
TCC
Gly
>WENV183809949
PVBE011434146
145604
Nitrososphaerota
TCC
Gly
>WENV183810153
PVBE011453969
145604
Nitrososphaerota
TCC
Gly
>WENV183793323
PVBE010004353
61752
Nitrososphaerota
TGA
Ser
>WENV183793324
PVBE010004353
145599
Nitrososphaerota
GGC
Ala
>WENV183800316
PVBE010578899
145599
Nitrososphaerota
GGC
Ala
>WENV183803121
PVBE010813753
151807
Nitrososphaerota
GCC
Gly
>WENV183805720
PVBE011046397
151807
Nitrososphaerota
GCC
Gly
>WENV183809199
PVBE011365298
151807
Nitrososphaerota
GCC
Gly
>WENV183794857
PVBE010128416
145602
Nitrososphaerota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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