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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1002752
SRR001670.18411
154643
Bacteroidota
CAT
Met
>SRA1002765
SRR001670.37711
412479
Bacteroidota
TTG
Gln
>SRA1002751
SRR001670.16455
175704
Bacteroidota
TGC
Ala
>SRA1002768
SRR001670.40603
175704
Bacteroidota
TGC
Ala
>SRA1002773
SRR001670.46595
147147
Bacteroidota
GTG
His
>SRA1002746
SRR001670.3047
339412
Bacteroidota
GGT
Thr
>SRA1002758
SRR001670.27392
344769
Bacteroidota
CTC
Glu
>SRA1002761
SRR001670.31371
338132
Bacteroidota
GCA
Cys
>SRA1002767
SRR001670.38683
338132
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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