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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
7 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1008788
SRR020491.25463
235734
Actinomycetota
>SRA1009526
SRR020491.266053
235734
Actinomycetota
>SRA1008998
SRR020491.92689
236214
Actinomycetota
CCA
Trp
>SRA1009024
SRR020491.100149
236214
Actinomycetota
CCA
Trp
>SRA1009079
SRR020491.114547
236214
Actinomycetota
CCA
Trp
>SRA1010153
SRR020491.473708
236214
Actinomycetota
CCA
Trp
>SRA1010179
SRR020491.481094
236214
Actinomycetota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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