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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1009093
SRR020491.117644
144817
Gammaproteobacteria
TCT
Arg
>SRA1008762
SRR020491.17375
144995
Gammaproteobacteria
GAT
Ile
>SRA1009185
SRR020491.144006
144995
Gammaproteobacteria
GAT
Ile
>SRA1009191
SRR020491.145984
144995
Gammaproteobacteria
GAT
Ile
>SRA1010109
SRR020491.460438
411596
Gammaproteobacteria
GCA
Cys
>SRA1008775
SRR020491.20903
145713
Gammaproteobacteria
CAT
Met
>SRA1008904
SRR020491.58055
95750
Gammaproteobacteria
TAG
Leu
>SRA1009935
SRR020491.406030
95750
Gammaproteobacteria
TAG
Leu
>SRA1009301
SRR020491.182138
411842
Gammaproteobacteria
GCA
Cys
>SRA1009667
SRR020491.316834
411842
Gammaproteobacteria
GCA
Cys
>SRA1010214
SRR020491.492019
411842
Gammaproteobacteria
GCA
Cys
>SRA1009377
SRR020491.207360
236366
Gammaproteobacteria
GTG
His
>SRA1009404
SRR020491.216279
236366
Gammaproteobacteria
GTG
His
>SRA1010077
SRR020491.448545
236366
Gammaproteobacteria
GTG
His
>SRA1010206
SRR020491.490087
236480
Gammaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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