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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1011289
SRR020492.356018
147117
Gammaproteobacteria
GTC
Asp
>SRA1010719
SRR020492.150812
195303
Gammaproteobacteria
GAT
Ile
>SRA1010356
SRR020492.26697
183605
Gammaproteobacteria
CCG
Arg
>SRA1010581
SRR020492.104891
152301
Gammaproteobacteria
GAT
Ile
>SRA1010637
SRR020492.123249
145713
Gammaproteobacteria
CAT
Met
>SRA1010425
SRR020492.52452
411842
Gammaproteobacteria
GCA
Cys
>SRA1011248
SRR020492.340952
411842
Gammaproteobacteria
GCA
Cys
>SRA1010783
SRR020492.171070
236366
Gammaproteobacteria
GTG
His
>SRA1010869
SRR020492.197966
236366
Gammaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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