This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
191 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1011656
SRR020493.34644
267489
Cyanobacteriota
GGC
Ala
>SRA1011884
SRR020493.109745
267489
Cyanobacteriota
GGC
Ala
>SRA1011956
SRR020493.133582
267489
Cyanobacteriota
GGC
Ala
>SRA1011612
SRR020493.19236
96363
Cyanobacteriota
TAG
Leu
>SRA1012086
SRR020493.177681
96363
Cyanobacteriota
TAG
Leu
>SRA1012171
SRR020493.204530
96363
Cyanobacteriota
TAG
Leu
>SRA1012241
SRR020493.227711
96363
Cyanobacteriota
TAG
Leu
>SRA1012250
SRR020493.231384
96363
Cyanobacteriota
TAG
Leu
>SRA1012476
SRR020493.324532
96363
Cyanobacteriota
TAG
Leu
>SRA1012477
SRR020493.324981
96363
Cyanobacteriota
TAG
Leu
>SRA1012515
SRR020493.336961
96363
Cyanobacteriota
TAG
Leu
>SRA1012558
SRR020493.351479
96363
Cyanobacteriota
TAG
Leu
>SRA1012636
SRR020493.378692
96363
Cyanobacteriota
TAG
Leu
>SRA1012748
SRR020493.416160
96363
Cyanobacteriota
TAG
Leu
>SRA1012791
SRR020493.431815
96363
Cyanobacteriota
TAG
Leu
>SRA1012876
SRR020493.464904
96363
Cyanobacteriota
TAG
Leu
>SRA1011598
SRR020493.14087
252089
Cyanobacteriota
GTG
His
>SRA1011600
SRR020493.15384
252089
Cyanobacteriota
GTG
His
>SRA1011635
SRR020493.26067
252089
Cyanobacteriota
GTG
His
>SRA1011637
SRR020493.26791
252089
Cyanobacteriota
GTG
His
>SRA1011679
SRR020493.42109
252089
Cyanobacteriota
GTG
His
>SRA1011723
SRR020493.57680
252089
Cyanobacteriota
GTG
His
>SRA1011736
SRR020493.62009
252089
Cyanobacteriota
GTG
His
>SRA1011767
SRR020493.70124
252089
Cyanobacteriota
GTG
His
>SRA1011877
SRR020493.103829
252089
Cyanobacteriota
GTG
His
>SRA1011910
SRR020493.118153
252089
Cyanobacteriota
GTG
His
>SRA1011963
SRR020493.135647
252089
Cyanobacteriota
GTG
His
>SRA1012076
SRR020493.174511
252089
Cyanobacteriota
GTG
His
>SRA1012165
SRR020493.202777
252089
Cyanobacteriota
GTG
His
>SRA1012420
SRR020493.306795
252089
Cyanobacteriota
GTG
His
>SRA1012454
SRR020493.319684
252089
Cyanobacteriota
GTG
His
>SRA1012469
SRR020493.323377
252089
Cyanobacteriota
GTG
His
>SRA1012603
SRR020493.366240
252089
Cyanobacteriota
GTG
His
>SRA1012609
SRR020493.368992
252089
Cyanobacteriota
GTG
His
>SRA1012678
SRR020493.393714
252089
Cyanobacteriota
GTG
His
>SRA1012685
SRR020493.395679
252089
Cyanobacteriota
GTG
His
>SRA1012763
SRR020493.420488
252089
Cyanobacteriota
GTG
His
>SRA1011669
SRR020493.38346
275577
Cyanobacteriota
TGC
Ala
>SRA1011697
SRR020493.47823
275577
Cyanobacteriota
TGC
Ala
>SRA1011817
SRR020493.86286
275577
Cyanobacteriota
TGC
Ala
>SRA1011864
SRR020493.100371
275577
Cyanobacteriota
TGC
Ala
>SRA1012103
SRR020493.180528
275577
Cyanobacteriota
TGC
Ala
>SRA1012450
SRR020493.317323
275577
Cyanobacteriota
TGC
Ala
>SRA1012457
SRR020493.320172
275577
Cyanobacteriota
TGC
Ala
>SRA1012544
SRR020493.346880
275577
Cyanobacteriota
TGC
Ala
>SRA1012598
SRR020493.364606
275577
Cyanobacteriota
TGC
Ala
>SRA1012634
SRR020493.378075
275577
Cyanobacteriota
TGC
Ala
>SRA1012641
SRR020493.380020
275577
Cyanobacteriota
TGC
Ala
>SRA1011620
SRR020493.23227
11030
Cyanobacteriota
GCT
Ser
>SRA1011850
SRR020493.96776
11030
Cyanobacteriota
GCT
Ser
>SRA1011925
SRR020493.122790
11030
Cyanobacteriota
GCT
Ser
>SRA1011927
SRR020493.122997
11030
Cyanobacteriota
GCT
Ser
>SRA1011935
SRR020493.125988
11030
Cyanobacteriota
GCT
Ser
>SRA1012156
SRR020493.200869
11030
Cyanobacteriota
GCT
Ser
>SRA1012244
SRR020493.228912
11030
Cyanobacteriota
GCT
Ser
>SRA1012517
SRR020493.337167
11030
Cyanobacteriota
GCT
Ser
>SRA1012522
SRR020493.339198
11030
Cyanobacteriota
GCT
Ser
>SRA1012614
SRR020493.370324
11030
Cyanobacteriota
GCT
Ser
>SRA1012715
SRR020493.404683
11030
Cyanobacteriota
GCT
Ser
>SRA1012798
SRR020493.434337
11030
Cyanobacteriota
GCT
Ser
>SRA1011746
SRR020493.66711
149253
Cyanobacteriota
ACG
Arg
>SRA1011778
SRR020493.75343
149253
Cyanobacteriota
ACG
Arg
>SRA1011820
SRR020493.87048
149253
Cyanobacteriota
ACG
Arg
>SRA1012417
SRR020493.303818
149253
Cyanobacteriota
ACG
Arg
>SRA1012501
SRR020493.332648
149253
Cyanobacteriota
ACG
Arg
>SRA1012743
SRR020493.413302
149253
Cyanobacteriota
ACG
Arg
>SRA1011771
SRR020493.71952
341034
Cyanobacteriota
GGT
Thr
>SRA1011810
SRR020493.84901
341034
Cyanobacteriota
GGT
Thr
>SRA1011922
SRR020493.121306
341034
Cyanobacteriota
GGT
Thr
>SRA1012162
SRR020493.201792
341034
Cyanobacteriota
GGT
Thr
>SRA1012235
SRR020493.226084
341034
Cyanobacteriota
GGT
Thr
>SRA1012264
SRR020493.236018
341034
Cyanobacteriota
GGT
Thr
>SRA1012275
SRR020493.238746
341034
Cyanobacteriota
GGT
Thr
>SRA1012347
SRR020493.279667
341034
Cyanobacteriota
GGT
Thr
>SRA1012359
SRR020493.285285
341034
Cyanobacteriota
GGT
Thr
>SRA1012461
SRR020493.321888
341034
Cyanobacteriota
GGT
Thr
>SRA1012646
SRR020493.381368
341034
Cyanobacteriota
GGT
Thr
>SRA1012918
SRR020493.481187
341034
Cyanobacteriota
GGT
Thr
>SRA1011588
SRR020493.6128
145761
Cyanobacteriota
GTC
Asp
>SRA1011796
SRR020493.81810
145761
Cyanobacteriota
GTC
Asp
>SRA1011874
SRR020493.103239
145761
Cyanobacteriota
GTC
Asp
>SRA1012085
SRR020493.177374
145761
Cyanobacteriota
GTC
Asp
>SRA1012194
SRR020493.210536
145761
Cyanobacteriota
GTC
Asp
>SRA1012260
SRR020493.234537
145761
Cyanobacteriota
GTC
Asp
>SRA1012262
SRR020493.235212
145761
Cyanobacteriota
GTC
Asp
>SRA1012323
SRR020493.266387
145761
Cyanobacteriota
GTC
Asp
>SRA1012499
SRR020493.332372
145761
Cyanobacteriota
GTC
Asp
>SRA1012549
SRR020493.349353
145761
Cyanobacteriota
GTC
Asp
>SRA1012660
SRR020493.387509
145761
Cyanobacteriota
GTC
Asp
>SRA1012729
SRR020493.409928
145761
Cyanobacteriota
GTC
Asp
>SRA1012747
SRR020493.415035
145761
Cyanobacteriota
GTC
Asp
>SRA1011680
SRR020493.42857
411836
Cyanobacteriota
TCC
Gly
>SRA1011720
SRR020493.56361
411836
Cyanobacteriota
TCC
Gly
>SRA1011923
SRR020493.121721
411836
Cyanobacteriota
TCC
Gly
>SRA1011987
SRR020493.144242
411836
Cyanobacteriota
TCC
Gly
>SRA1012056
SRR020493.169041
411836
Cyanobacteriota
TCC
Gly
>SRA1012192
SRR020493.209977
411836
Cyanobacteriota
TCC
Gly
>SRA1012226
SRR020493.221651
411836
Cyanobacteriota
TCC
Gly
>SRA1012327
SRR020493.268689
411836
Cyanobacteriota
TCC
Gly
>SRA1012333
SRR020493.272463
411836
Cyanobacteriota
TCC
Gly
>SRA1012690
SRR020493.397239
411836
Cyanobacteriota
TCC
Gly
>SRA1012874
SRR020493.464275
411836
Cyanobacteriota
TCC
Gly
>SRA1012929
SRR020493.486658
411836
Cyanobacteriota
TCC
Gly
>SRA1011618
SRR020493.20880
164907
Cyanobacteriota
GGG
Pro
>SRA1011640
SRR020493.27727
164907
Cyanobacteriota
GGG
Pro
>SRA1011958
SRR020493.134344
164907
Cyanobacteriota
GGG
Pro
>SRA1011994
SRR020493.147331
164907
Cyanobacteriota
GGG
Pro
>SRA1012150
SRR020493.199013
164907
Cyanobacteriota
GGG
Pro
>SRA1012299
SRR020493.251146
164907
Cyanobacteriota
GGG
Pro
>SRA1012712
SRR020493.403933
164907
Cyanobacteriota
GGG
Pro
>SRA1012842
SRR020493.451305
164907
Cyanobacteriota
GGG
Pro
>SRA1012895
SRR020493.474064
164907
Cyanobacteriota
GGG
Pro
>SRA1011627
SRR020493.24128
366531
Cyanobacteriota
TTG
Gln
>SRA1011638
SRR020493.27373
366531
Cyanobacteriota
TTG
Gln
>SRA1011719
SRR020493.56223
366531
Cyanobacteriota
TTG
Gln
>SRA1011770
SRR020493.71843
366531
Cyanobacteriota
TTG
Gln
>SRA1011784
SRR020493.77794
366531
Cyanobacteriota
TTG
Gln
>SRA1012220
SRR020493.218985
366531
Cyanobacteriota
TTG
Gln
>SRA1012672
SRR020493.390083
366531
Cyanobacteriota
TTG
Gln
>SRA1012702
SRR020493.400969
366531
Cyanobacteriota
TTG
Gln
>SRA1012758
SRR020493.419327
366531
Cyanobacteriota
TTG
Gln
>SRA1012911
SRR020493.479372
366531
Cyanobacteriota
TTG
Gln
>SRA1011590
SRR020493.6796
240100
Cyanobacteriota
CAT
Met
>SRA1012059
SRR020493.169589
240100
Cyanobacteriota
CAT
Met
>SRA1012107
SRR020493.181625
240100
Cyanobacteriota
CAT
Met
>SRA1012202
SRR020493.213083
240100
Cyanobacteriota
CAT
Met
>SRA1012227
SRR020493.221827
240100
Cyanobacteriota
CAT
Met
>SRA1012510
SRR020493.335295
240100
Cyanobacteriota
CAT
Met
>SRA1012534
SRR020493.342824
240100
Cyanobacteriota
CAT
Met
>SRA1012725
SRR020493.407439
240100
Cyanobacteriota
CAT
Met
>SRA1012797
SRR020493.434080
240100
Cyanobacteriota
CAT
Met
>SRA1012830
SRR020493.445364
240100
Cyanobacteriota
CAT
Met
>SRA1012856
SRR020493.456118
240100
Cyanobacteriota
CAT
Met
>SRA1011582
SRR020493.3559
95762
Cyanobacteriota
AAG
Leu
>SRA1011811
SRR020493.85208
95762
Cyanobacteriota
AAG
Leu
>SRA1011873
SRR020493.102838
95762
Cyanobacteriota
AAG
Leu
>SRA1011902
SRR020493.117781
95762
Cyanobacteriota
AAG
Leu
>SRA1011978
SRR020493.141737
95762
Cyanobacteriota
AAG
Leu
>SRA1012393
SRR020493.294830
95762
Cyanobacteriota
AAG
Leu
>SRA1012677
SRR020493.393311
95762
Cyanobacteriota
AAG
Leu
>SRA1012704
SRR020493.401567
95762
Cyanobacteriota
AAG
Leu
>SRA1011641
SRR020493.28323
363933
Cyanobacteriota
GTT
Asn
>SRA1011753
SRR020493.67274
363933
Cyanobacteriota
GTT
Asn
>SRA1011909
SRR020493.117921
363933
Cyanobacteriota
GTT
Asn
>SRA1012306
SRR020493.255424
363933
Cyanobacteriota
GTT
Asn
>SRA1012384
SRR020493.290460
363933
Cyanobacteriota
GTT
Asn
>SRA1012490
SRR020493.330026
363933
Cyanobacteriota
GTT
Asn
>SRA1012601
SRR020493.365682
363933
Cyanobacteriota
GTT
Asn
>SRA1012735
SRR020493.411020
162346
Cyanobacteriota
GGG
Pro
>SRA1011750
SRR020493.67031
37357
Cyanobacteriota
TAA
Leu
>SRA1011980
SRR020493.142225
37357
Cyanobacteriota
TAA
Leu
>SRA1012121
SRR020493.186719
37357
Cyanobacteriota
TAA
Leu
>SRA1012126
SRR020493.189038
37357
Cyanobacteriota
TAA
Leu
>SRA1012144
SRR020493.195538
37357
Cyanobacteriota
TAA
Leu
>SRA1012367
SRR020493.286709
37357
Cyanobacteriota
TAA
Leu
>SRA1012716
SRR020493.404993
37357
Cyanobacteriota
TAA
Leu
>SRA1012812
SRR020493.439664
37357
Cyanobacteriota
TAA
Leu
>SRA1012879
SRR020493.465484
37357
Cyanobacteriota
TAA
Leu
>SRA1011722
SRR020493.57152
145893
Cyanobacteriota
CAT
Met
>SRA1011785
SRR020493.77800
145893
Cyanobacteriota
CAT
Met
>SRA1011913
SRR020493.119087
145893
Cyanobacteriota
CAT
Met
>SRA1011937
SRR020493.126714
145893
Cyanobacteriota
CAT
Met
>SRA1012015
SRR020493.155055
145893
Cyanobacteriota
CAT
Met
>SRA1012047
SRR020493.164376
145893
Cyanobacteriota
CAT
Met
>SRA1012317
SRR020493.263438
145893
Cyanobacteriota
CAT
Met
>SRA1012328
SRR020493.268920
145893
Cyanobacteriota
CAT
Met
>SRA1012407
SRR020493.300814
145893
Cyanobacteriota
CAT
Met
>SRA1012649
SRR020493.382070
145893
Cyanobacteriota
CAT
Met
>SRA1012689
SRR020493.397166
145893
Cyanobacteriota
CAT
Met
>SRA1012912
SRR020493.479580
145893
Cyanobacteriota
CAT
Met
>SRA1011776
SRR020493.74811
23971
Cyanobacteriota
TGA
Ser
>SRA1011974
SRR020493.140398
23971
Cyanobacteriota
TGA
Ser
>SRA1012035
SRR020493.159984
23971
Cyanobacteriota
TGA
Ser
>SRA1012070
SRR020493.172796
23971
Cyanobacteriota
TGA
Ser
>SRA1012073
SRR020493.173564
23971
Cyanobacteriota
TGA
Ser
>SRA1012172
SRR020493.205244
23971
Cyanobacteriota
TGA
Ser
>SRA1012316
SRR020493.263224
23971
Cyanobacteriota
TGA
Ser
>SRA1012466
SRR020493.322711
23971
Cyanobacteriota
TGA
Ser
>SRA1012486
SRR020493.328804
23971
Cyanobacteriota
TGA
Ser
>SRA1012721
SRR020493.406834
23971
Cyanobacteriota
TGA
Ser
>SRA1012828
SRR020493.443907
23971
Cyanobacteriota
TGA
Ser
>SRA1011683
SRR020493.43676
275071
Cyanobacteriota
CCA
Trp
>SRA1011806
SRR020493.83797
275071
Cyanobacteriota
CCA
Trp
>SRA1011885
SRR020493.110385
275071
Cyanobacteriota
CCA
Trp
>SRA1011908
SRR020493.117906
275071
Cyanobacteriota
CCA
Trp
>SRA1012247
SRR020493.230158
275071
Cyanobacteriota
CCA
Trp
>SRA1012298
SRR020493.251113
275071
Cyanobacteriota
CCA
Trp
>SRA1012369
SRR020493.286786
275071
Cyanobacteriota
CCA
Trp
>SRA1012425
SRR020493.307639
275071
Cyanobacteriota
CCA
Trp
>SRA1012523
SRR020493.340222
275071
Cyanobacteriota
CCA
Trp
>SRA1012573
SRR020493.356776
275071
Cyanobacteriota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK