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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1023550
SRR035084.120993
145683
Bacteroidota
TGC
Ala
>SRA1025173
SRR035084.506782
145683
Bacteroidota
TGC
Ala
>SRA1023276
SRR035084.60254
150454
Bacteroidota
TGT
Thr
>SRA1024243
SRR035084.280086
150454
Bacteroidota
TGT
Thr
>SRA1024208
SRR035084.272853
241019
Bacteroidota
CAT
Met
>SRA1023358
SRR035084.77639
165001
Bacteroidota
GTT
Asn
>SRA1025297
SRR035084.544415
165001
Bacteroidota
GTT
Asn
>SRA1024018
SRR035084.231239
338625
Bacteroidota
TTC
Glu
>SRA1024912
SRR035084.434529
44938
Bacteroidota
TGA
Ser
>SRA1024965
SRR035084.448160
127414
Bacteroidota
TGG
Pro
>SRA1024813
SRR035084.409749
148047
Bacteroidota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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