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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1049179
SRR035095.33609
238645
Chlorobiota
GGC
Ala
>SRA1049565
SRR035095.96669
238645
Chlorobiota
GGC
Ala
>SRA1049829
SRR035095.144630
236753
Chlorobiota
TGG
Pro
>SRA1049174
SRR035095.32498
146232
Chlorobiota
GGG
Pro
>SRA1050112
SRR035095.194884
146232
Chlorobiota
GGG
Pro
>SRA1050583
SRR035095.296534
237026
Chlorobiota
CGG
Pro
>SRA1050035
SRR035095.179794
339069
Chlorobiota
TTG
Gln
>SRA1049753
SRR035095.134575
126816
Chlorobiota
GTC
Asp
>SRA1049746
SRR035095.132103
126816
Chlorobiota
GTC
Asp
>SRA1049819
SRR035095.142205
236974
Chlorobiota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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