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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1050893
SRR035096.44150
11030
Cyanobacteriota
GCT
Ser
>SRA1051127
SRR035096.91435
11030
Cyanobacteriota
GCT
Ser
>SRA1051248
SRR035096.119613
11030
Cyanobacteriota
GCT
Ser
>SRA1051087
SRR035096.83252
344607
Cyanobacteriota
CCC
Gly
>SRA1050928
SRR035096.53245
387387
Cyanobacteriota
GAC
Val
>SRA1051229
SRR035096.113123
45941
Cyanobacteriota
CGA
Ser
>SRA1051313
SRR035096.135363
45941
Cyanobacteriota
CGA
Ser
>SRA1051296
SRR035096.133602
58999
Cyanobacteriota
CAG
Leu
>SRA1051334
SRR035096.143323
237009
Cyanobacteriota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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