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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV037622
AACY021870246
86164
Nitrososphaerota
TGA
Ser
>WENV058707
AACY023339142
86164
Nitrososphaerota
TGA
Ser
>WENV046996
AACY022633136
176910
Nitrososphaerota
GGC
Ala
>WENV068915
AACY023744269
176913
Nitrososphaerota
CCC
Gly
>WENV001697
AACY020048255
59214
Nitrososphaerota
GAG
Leu
>WENV069891
AACY023787930
59214
Nitrososphaerota
GAG
Leu
>WENV004081
AACY020114419
158197
Nitrososphaerota
GAT
Ile
>WENV015094
AACY020423268
158197
Nitrososphaerota
GAT
Ile
>WENV020915
AACY020560680
158197
Nitrososphaerota
GAT
Ile
>WENV021243
AACY020564270
158197
Nitrososphaerota
GAT
Ile
>WENV035063
AACY021667251
158197
Nitrososphaerota
GAT
Ile
>WENV043982
AACY022377339
158197
Nitrososphaerota
GAT
Ile
>WENV047010
AACY022634035
158197
Nitrososphaerota
GAT
Ile
>WENV052085
AACY023003506
158197
Nitrososphaerota
GAT
Ile
>WENV052714
AACY023044613
158197
Nitrososphaerota
GAT
Ile
>WENV068011
AACY023710844
158197
Nitrososphaerota
GAT
Ile
>WENV069866
AACY023786699
158197
Nitrososphaerota
GAT
Ile
>WENV076137
AACY024078682
158197
Nitrososphaerota
GAT
Ile
>WENV076152
AACY024079549
158197
Nitrososphaerota
GAT
Ile
>WENV056873
AACY023270610
413299
Nitrososphaerota
>WENV016613
AACY020466739
413299
Nitrososphaerota
>WENV057004
AACY023279264
413299
Nitrososphaerota
>WENV069415
AACY023765609
413299
Nitrososphaerota
>WENV068902
AACY023743756
183714
Nitrososphaerota
GCC
Gly
>WENV058303
AACY023323779
183714
Nitrososphaerota
GCC
Gly
>WENV021990
AACY020613546
183714
Nitrososphaerota
GCC
Gly
>WENV069012
AACY023748423
176915
Nitrososphaerota
TCC
Gly
>WENV066775
AACY023662190
176915
Nitrososphaerota
TCC
Gly
>WENV057086
AACY023283820
176915
Nitrososphaerota
TCC
Gly
>WENV056936
AACY023274841
176915
Nitrososphaerota
TCC
Gly
>WENV053167
AACY023078938
176915
Nitrososphaerota
TCC
Gly
>WENV040583
AACY022093887
176915
Nitrososphaerota
TCC
Gly
>WENV033878
AACY021562378
176915
Nitrososphaerota
TCC
Gly
>WENV032662
AACY021464750
176915
Nitrososphaerota
TCC
Gly
>WENV032084
AACY021418279
176915
Nitrososphaerota
TCC
Gly
>WENV028525
AACY021127255
176915
Nitrososphaerota
TCC
Gly
>WENV022229
AACY020632874
176915
Nitrososphaerota
TCC
Gly
>WENV020730
AACY020557694
176915
Nitrososphaerota
TCC
Gly
>WENV015154
AACY020425779
176915
Nitrososphaerota
TCC
Gly
>WENV015030
AACY020420492
176915
Nitrososphaerota
TCC
Gly
>WENV013655
AACY020375549
176915
Nitrososphaerota
TCC
Gly
>WENV069426
AACY023766173
176915
Nitrososphaerota
TCC
Gly
>WENV076151
AACY024079509
176915
Nitrososphaerota
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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