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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV077184
AAFX01001996
400216
Alphaproteobacteria
TTG
Gln
>WENV077203
AAFX01006029
229944
Alphaproteobacteria
CGG
Pro
>WENV077208
AAFX01006583
404744
Alphaproteobacteria
GCC
Gly
>WENV077249
AAFX01012254
229944
Alphaproteobacteria
CGG
Pro
>WENV077283
AAFX01016129
400945
Alphaproteobacteria
GCC
Gly
>WENV077315
AAFX01022008
201760
Alphaproteobacteria
GAT
Ile
>WENV077348
AAFX01024763
400029
Alphaproteobacteria
GGT
Thr
>WENV077363
AAFX01027354
176633
Alphaproteobacteria
GAT
Ile
>WENV077377
AAFX01028663
282748
Alphaproteobacteria
CGT
Thr
>WENV077486
AAFX01045738
229944
Alphaproteobacteria
CGG
Pro
>WENV077521
AAFX01052939
229944
Alphaproteobacteria
CGG
Pro
>WENV077551
AAFX01059097
179995
Alphaproteobacteria
TCT
Arg
>WENV077625
AAFX01074907
282748
Alphaproteobacteria
CGT
Thr
>WENV077665
AAFX01083333
320067
Alphaproteobacteria
CGC
Ala
>WENV077668
AAFX01084042
406748
Alphaproteobacteria
TAC
Val
>WENV077679
AAFX01086580
402795
Alphaproteobacteria
GCC
Gly
>WENV077705
AAFX01091226
285028
Alphaproteobacteria
CTT
Lys
>WENV077771
AAFX01104366
293686
Alphaproteobacteria
CGT
Thr
>WENV077803
AAFX01109754
176633
Alphaproteobacteria
GAT
Ile
>WENV077842
AAFX01113746
281409
Alphaproteobacteria
TTT
Lys
>WENV077855
AAFX01114736
282589
Alphaproteobacteria
GGC
Ala
>WENV077874
AAFX01117418
287439
Alphaproteobacteria
CCA
Trp
>WENV077918
AAFX01125310
287439
Alphaproteobacteria
CCA
Trp
>WENV077930
AAFX01127855
402067
Alphaproteobacteria
GCC
Gly
>WENV077942
AAFX01131898
287439
Alphaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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