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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV11100650
AEWW01004243
117900
Gammaproteobacteria
GTA
Tyr
>WENV11100651
AEWW01004243
117900
Gammaproteobacteria
GTA
Tyr
>WENV170000292
AEWW01004243
117900
Gammaproteobacteria
GTA
Tyr
>WENV170000293
AEWW01004243
117900
Gammaproteobacteria
GTA
Tyr
>WENV11100737
AEWW01021213
58793
Gammaproteobacteria
TGA
Ser
>WENV170000379
AEWW01021213
58793
Gammaproteobacteria
TGA
Ser
>WENV11100645
AEWW01004023
281314
Gammaproteobacteria
TGT
Thr
>WENV170000287
AEWW01004023
281314
Gammaproteobacteria
TGT
Thr
>WENV11100789
AEWW01029955
366546
Gammaproteobacteria
GTG
His
>WENV170000431
AEWW01029955
366546
Gammaproteobacteria
GTG
His
>WENV11100747
AEWW01024721
117901
Gammaproteobacteria
GTA
Tyr
>WENV170000389
AEWW01024721
117901
Gammaproteobacteria
GTA
Tyr
>WENV11100690
AEWW01013356
480352
Gammaproteobacteria
GCA
Cys
>WENV170000332
AEWW01013356
480352
Gammaproteobacteria
GCA
Cys
>WENV11100712
AEWW01016985
199601
Gammaproteobacteria
GGG
Pro
>WENV170000354
AEWW01016985
199601
Gammaproteobacteria
GGG
Pro
>WENV11100649
AEWW01004136
399301
Gammaproteobacteria
TTG
Gln
>WENV170000291
AEWW01004136
399301
Gammaproteobacteria
TTG
Gln
>WENV11100711
AEWW01016820
463483
Gammaproteobacteria
CCT
Arg
>WENV11100771
AEWW01026499
463483
Gammaproteobacteria
CCT
Arg
>WENV170000353
AEWW01016820
463483
Gammaproteobacteria
CCT
Arg
>WENV170000413
AEWW01026499
463483
Gammaproteobacteria
CCT
Arg
>WENV11100695
AEWW01014642
371122
Gammaproteobacteria
CAT
Met
>WENV170000337
AEWW01014642
371122
Gammaproteobacteria
CAT
Met
>WENV170000339
AEWW01015060
96714
Gammaproteobacteria
CAG
Leu
>WENV170000369
AEWW01018929
96714
Gammaproteobacteria
CAG
Leu
>WENV11100746
AEWW01024721
281352
Gammaproteobacteria
TGT
Thr
>WENV170000388
AEWW01024721
281352
Gammaproteobacteria
TGT
Thr
>WENV11100696
AEWW01014830
328497
Gammaproteobacteria
GAA
Phe
>WENV170000338
AEWW01014830
328497
Gammaproteobacteria
GAA
Phe
>WENV11100693
AEWW01014613
200517
Gammaproteobacteria
GAC
Val
>WENV170000335
AEWW01014613
200517
Gammaproteobacteria
GAC
Val
>WENV11100827
AEWW01039273
4101
Gammaproteobacteria
>WENV170000469
AEWW01039273
4101
Gammaproteobacteria
>WENV11100674
AEWW01010319
238305
Gammaproteobacteria
TCT
Arg
>WENV170000316
AEWW01010319
238305
Gammaproteobacteria
TCT
Arg
>WENV11100701
AEWW01015501
281354
Gammaproteobacteria
CCA
Trp
>WENV170000343
AEWW01015501
281354
Gammaproteobacteria
CCA
Trp
>WENV11100691
AEWW01013356
113312
Gammaproteobacteria
TAA
Leu
>WENV170000333
AEWW01013356
113312
Gammaproteobacteria
TAA
Leu
>WENV11100702
AEWW01015594
73163
Gammaproteobacteria
GAG
Leu
>WENV170000344
AEWW01015594
73163
Gammaproteobacteria
GAG
Leu
>WENV11100790
AEWW01029955
73031
Gammaproteobacteria
>WENV170000432
AEWW01029955
73031
Gammaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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