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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170012504
ASRK01010365
316553
Gammaproteobacteria
>WENV170012470
ASRK01001777
73068
Gammaproteobacteria
CAA
Leu
>WENV170012461
ASRK01000760
341033
Gammaproteobacteria
GTT
Asn
>WENV170012467
ASRK01001495
56104
Gammaproteobacteria
GGA
Ser
>WENV170012456
ASRK01000539
180998
Gammaproteobacteria
GAC
Val
>WENV170012486
ASRK01003938
303413
Gammaproteobacteria
GGT
Thr
>WENV170012464
ASRK01000972
334421
Gammaproteobacteria
TGT
Thr
>WENV170012494
ASRK01008192
178439
Gammaproteobacteria
GAT
Ile
>WENV170012492
ASRK01007291
176256
Gammaproteobacteria
GAT
Ile
>WENV170012474
ASRK01001820
480411
Gammaproteobacteria
GCA
Cys
>WENV170012500
ASRK01009374
285823
Gammaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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