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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
8 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170014002
AVFP01001422
198858
Alphaproteobacteria
CAT
Met
>WENV170014010
AVFP01001670
282587
Alphaproteobacteria
>WENV170014031
AVFP01002467
482973
Alphaproteobacteria
TCC
Gly
>WENV170014033
AVFP01002786
400384
Alphaproteobacteria
TTC
Glu
>WENV170014042
AVFP01003277
488318
Alphaproteobacteria
TCC
Gly
>WENV170014104
AVFP01008219
179941
Alphaproteobacteria
CAT
Met
>WENV170014107
AVFP01008478
400045
Alphaproteobacteria
GCC
Gly
>WENV170014109
AVFP01008665
228484
Alphaproteobacteria
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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