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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170014607
AYSL01000255
398995
Alphaproteobacteria
CAC
Val
>WENV170014723
AYSL01007319
399001
Alphaproteobacteria
GAC
Val
>WENV170014737
AYSL01008084
176146
Alphaproteobacteria
CAT
Met
>WENV170014771
AYSL01010221
280788
Alphaproteobacteria
TTT
Lys
>WENV170014712
AYSL01006174
283601
Alphaproteobacteria
CGT
Thr
>WENV170014732
AYSL01007677
280784
Alphaproteobacteria
TGC
Ala
>WENV170014734
AYSL01007798
280784
Alphaproteobacteria
TGC
Ala
>WENV170014742
AYSL01008540
75222
Alphaproteobacteria
GAG
Leu
>WENV170014720
AYSL01006879
29729
Alphaproteobacteria
GCT
Ser
>WENV170014674
AYSL01004303
176153
Alphaproteobacteria
CAT
Met
>WENV170014759
AYSL01009511
398994
Alphaproteobacteria
GTT
Asn
>WENV170014614
AYSL01000884
30763
Alphaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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