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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
76 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170014710
AYSL01006143
21965
Gammaproteobacteria
TGA
Ser
>WENV170014653
AYSL01002917
281908
Gammaproteobacteria
GTG
His
>WENV170014724
AYSL01007324
281908
Gammaproteobacteria
GTG
His
>WENV170014663
AYSL01003440
281440
Gammaproteobacteria
TGT
Thr
>WENV170014656
AYSL01003032
281439
Gammaproteobacteria
GAA
Phe
>WENV170014772
AYSL01010477
281439
Gammaproteobacteria
GAA
Phe
>WENV170014627
AYSL01001493
176796
Gammaproteobacteria
GGG
Pro
>WENV170014729
AYSL01007558
281437
Gammaproteobacteria
CCA
Trp
>WENV170014683
AYSL01004992
21927
Gammaproteobacteria
GGA
Ser
>WENV170014606
AYSL01000243
399352
Gammaproteobacteria
GCC
Gly
>WENV170014622
AYSL01001364
399352
Gammaproteobacteria
GCC
Gly
>WENV170014623
AYSL01001385
20618
Gammaproteobacteria
GGA
Ser
>WENV170014688
AYSL01005283
284022
Gammaproteobacteria
TGT
Thr
>WENV170014722
AYSL01007144
284022
Gammaproteobacteria
TGT
Thr
>WENV170014749
AYSL01008994
281441
Gammaproteobacteria
CCT
Arg
>WENV170014700
AYSL01005798
176795
Gammaproteobacteria
CAT
Met
>WENV170014686
AYSL01005110
281438
Gammaproteobacteria
GGC
Ala
>WENV170014777
AYSL01010788
74240
Gammaproteobacteria
CAA
Leu
>WENV170014741
AYSL01008401
74240
Gammaproteobacteria
CAA
Leu
>WENV170014643
AYSL01002191
190704
Gammaproteobacteria
GAT
Ile
>WENV170014670
AYSL01003990
13452
Gammaproteobacteria
GCT
Ser
>WENV170014666
AYSL01003440
399353
Gammaproteobacteria
GGT
Thr
>WENV170014649
AYSL01002494
178471
Gammaproteobacteria
GTT
Asn
>WENV170014650
AYSL01002494
178471
Gammaproteobacteria
GTT
Asn
>WENV170014642
AYSL01002181
176790
Gammaproteobacteria
ACG
Arg
>WENV170014755
AYSL01009362
176790
Gammaproteobacteria
ACG
Arg
>WENV170014616
AYSL01001157
281432
Gammaproteobacteria
TTG
Gln
>WENV170014617
AYSL01001157
281432
Gammaproteobacteria
TTG
Gln
>WENV170014618
AYSL01001183
281432
Gammaproteobacteria
TTG
Gln
>WENV170014621
AYSL01001332
281432
Gammaproteobacteria
TTG
Gln
>WENV170014773
AYSL01010527
281432
Gammaproteobacteria
TTG
Gln
>WENV170014702
AYSL01005863
200241
Gammaproteobacteria
GTC
Asp
>WENV170014719
AYSL01006707
200241
Gammaproteobacteria
GTC
Asp
>WENV170014762
AYSL01009560
200241
Gammaproteobacteria
GTC
Asp
>WENV170014664
AYSL01003440
140806
Gammaproteobacteria
GTA
Tyr
>WENV170014628
AYSL01001568
176791
Gammaproteobacteria
TGG
Pro
>WENV170014669
AYSL01003909
176545
Gammaproteobacteria
CAT
Met
>WENV170014610
AYSL01000572
30083
Gammaproteobacteria
GCT
Ser
>WENV170014655
AYSL01003028
30083
Gammaproteobacteria
GCT
Ser
>WENV170014657
AYSL01003156
401684
Gammaproteobacteria
CCT
Arg
>WENV170014714
AYSL01006398
401684
Gammaproteobacteria
CCT
Arg
>WENV170014630
AYSL01001568
281433
Gammaproteobacteria
GTG
His
>WENV170014774
AYSL01010647
74048
Gammaproteobacteria
CAA
Leu
>WENV170014752
AYSL01009061
481678
Gammaproteobacteria
GCA
Cys
>WENV170014680
AYSL01004808
481678
Gammaproteobacteria
GCA
Cys
>WENV170014757
AYSL01009422
176544
Gammaproteobacteria
CAT
Met
>WENV170014632
AYSL01001730
176544
Gammaproteobacteria
CAT
Met
>WENV170014744
AYSL01008713
176544
Gammaproteobacteria
CAT
Met
>WENV170014677
AYSL01004382
180680
Gammaproteobacteria
GAC
Val
>WENV170014646
AYSL01002324
180680
Gammaproteobacteria
GAC
Val
>WENV170014641
AYSL01002105
180680
Gammaproteobacteria
GAC
Val
>WENV170014740
AYSL01008379
180678
Gammaproteobacteria
CCG
Arg
>WENV170014658
AYSL01003325
180678
Gammaproteobacteria
CCG
Arg
>WENV170014703
AYSL01005909
180678
Gammaproteobacteria
CCG
Arg
>WENV170014711
AYSL01006143
281434
Gammaproteobacteria
GTT
Asn
>WENV170014760
AYSL01009560
281434
Gammaproteobacteria
GTT
Asn
>WENV170014629
AYSL01001568
176792
Gammaproteobacteria
TCT
Arg
>WENV170014715
AYSL01006529
120822
Gammaproteobacteria
GAG
Leu
>WENV170014746
AYSL01008851
285547
Gammaproteobacteria
TTG
Gln
>WENV170014625
AYSL01001435
285547
Gammaproteobacteria
TTG
Gln
>WENV170014770
AYSL01010149
180681
Gammaproteobacteria
TGG
Pro
>WENV170014763
AYSL01009575
180681
Gammaproteobacteria
TGG
Pro
>WENV170014726
AYSL01007324
180681
Gammaproteobacteria
TGG
Pro
>WENV170014661
AYSL01003409
180681
Gammaproteobacteria
TGG
Pro
>WENV170014651
AYSL01002917
180681
Gammaproteobacteria
TGG
Pro
>WENV170014624
AYSL01001435
118640
Gammaproteobacteria
TAG
Leu
>WENV170014626
AYSL01001435
118640
Gammaproteobacteria
TAG
Leu
>WENV170014633
AYSL01001730
118640
Gammaproteobacteria
TAG
Leu
>WENV170014654
AYSL01002917
118640
Gammaproteobacteria
TAG
Leu
>WENV170014725
AYSL01007324
118640
Gammaproteobacteria
TAG
Leu
>WENV170014769
AYSL01010149
118640
Gammaproteobacteria
TAG
Leu
>WENV170014665
AYSL01003440
480549
Gammaproteobacteria
TCC
Gly
>WENV170014691
AYSL01005283
285826
Gammaproteobacteria
GGT
Thr
>WENV170014717
AYSL01006583
74110
Gammaproteobacteria
CAA
Leu
>WENV170014756
AYSL01009402
74110
Gammaproteobacteria
CAA
Leu
>WENV170014620
AYSL01001323
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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