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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV082099
BAAU01020916
99852
Bacillota
GTA
Tyr
>WENV082104
BAAU01021158
404076
Bacillota
GCC
Gly
>WENV081918
BAAU01004300
349107
Bacillota
GCC
Gly
>WENV082125
BAAU01022408
349107
Bacillota
GCC
Gly
>WENV081879
BAAU01002929
184504
Bacillota
GTC
Asp
>WENV082103
BAAU01021158
184504
Bacillota
GTC
Asp
>WENV081919
BAAU01004300
280428
Bacillota
GAA
Phe
>WENV082122
BAAU01022408
280428
Bacillota
GAA
Phe
>WENV082124
BAAU01022408
280466
Bacillota
TAC
Val
>WENV082045
BAAU01012355
280492
Bacillota
CTT
Lys
>WENV082160
BAAU01026765
175842
Bacillota
CAC
Val
>WENV081809
BAAU01000673
175842
Bacillota
CAC
Val
>WENV081807
BAAU01000640
295166
Bacillota
TGC
Ala
>WENV082121
BAAU01022321
284506
Bacillota
CCA
Trp
>WENV081852
BAAU01001937
280447
Bacillota
GAC
Val
>WENV081831
BAAU01001138
5692
Bacillota
GCT
Ser
>WENV081744
BAAU01000009
175825
Bacillota
GAT
Ile
>WENV081952
BAAU01006353
284723
Bacillota
TAC
Val
>WENV082130
BAAU01022587
284723
Bacillota
TAC
Val
>WENV081898
BAAU01003369
73009
Bacillota
CAG
Leu
>WENV081773
BAAU01000404
73009
Bacillota
CAG
Leu
>WENV081988
BAAU01008850
175859
Bacillota
TCT
Arg
>WENV081972
BAAU01007302
175859
Bacillota
TCT
Arg
>WENV081743
BAAU01000009
280436
Bacillota
TGC
Ala
>WENV082116
BAAU01021729
290325
Bacillota
GCC
Gly
>WENV082035
BAAU01011325
175831
Bacillota
ACG
Arg
>WENV082012
BAAU01010143
175831
Bacillota
ACG
Arg
>WENV081760
BAAU01000177
175831
Bacillota
ACG
Arg
>WENV081899
BAAU01003490
183957
Bacillota
CCT
Arg
>WENV082043
BAAU01012273
175868
Bacillota
GTT
Asn
>WENV081814
BAAU01000807
398854
Bacillota
CTC
Glu
>WENV081811
BAAU01000738
398854
Bacillota
CTC
Glu
>WENV081745
BAAU01000010
398854
Bacillota
CTC
Glu
>WENV081968
BAAU01006939
291576
Bacillota
CCC
Gly
>WENV081909
BAAU01003925
480324
Bacillota
TTG
Gln
>WENV081787
BAAU01000454
175899
Bacillota
GTC
Asp
>WENV082133
BAAU01022948
303718
Bacillota
TGT
Thr
>WENV082034
BAAU01011324
280444
Bacillota
GGT
Thr
>WENV081779
BAAU01000429
280444
Bacillota
GGT
Thr
>WENV082146
BAAU01024890
46643
Bacillota
TGA
Ser
>WENV082064
BAAU01015054
179755
Bacillota
CCG
Arg
>WENV081946
BAAU01005923
179755
Bacillota
CCG
Arg
>WENV081905
BAAU01003608
179755
Bacillota
CCG
Arg
>WENV081951
BAAU01006353
175915
Bacillota
GTC
Asp
>WENV082170
BAAU01027962
398852
Bacillota
CTC
Glu
>WENV082147
BAAU01024914
289123
Bacillota
GGT
Thr
>WENV081920
BAAU01004300
175849
Bacillota
GTC
Asp
>WENV081780
BAAU01000429
175849
Bacillota
GTC
Asp
>WENV081944
BAAU01005851
280486
Bacillota
TGC
Ala
>WENV081926
BAAU01004648
280486
Bacillota
TGC
Ala
>WENV081929
BAAU01004710
280486
Bacillota
TGC
Ala
>WENV082096
BAAU01020694
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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