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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV085168
BABB01009456
280500
Bacillota
TGC
Ala
>WENV085006
BABB01000367
280492
Bacillota
CTT
Lys
>WENV085162
BABB01008121
280427
Bacillota
TAC
Val
>WENV085167
BABB01009456
175916
Bacillota
GAT
Ile
>WENV084954
BABB01000021
175899
Bacillota
GTC
Asp
>WENV084985
BABB01000286
175899
Bacillota
GTC
Asp
>WENV085024
BABB01000598
56079
Bacillota
AAG
Leu
>WENV084960
BABB01000083
56079
Bacillota
AAG
Leu
>WENV085140
BABB01006074
175911
Bacillota
GTC
Asp
>WENV085135
BABB01005876
480337
Bacillota
TCC
Gly
>WENV085209
BABB01015076
398857
Bacillota
TTC
Glu
>WENV085029
BABB01000628
117745
Bacillota
GTA
Tyr
>WENV084951
BABB01000021
117745
Bacillota
GTA
Tyr
>WENV085128
BABB01005516
46643
Bacillota
TGA
Ser
>WENV085020
BABB01000551
46643
Bacillota
TGA
Ser
>WENV085179
BABB01011132
280547
Bacillota
GTC
Asp
>WENV085161
BABB01008121
175915
Bacillota
GTC
Asp
>WENV084949
BABB01000021
280462
Bacillota
GAA
Phe
>WENV085094
BABB01002692
398852
Bacillota
CTC
Glu
>WENV085065
BABB01001694
398852
Bacillota
CTC
Glu
>WENV084978
BABB01000203
398852
Bacillota
CTC
Glu
>WENV084955
BABB01000032
398852
Bacillota
CTC
Glu
>WENV085148
BABB01006775
175857
Bacillota
GTG
His
>WENV085090
BABB01002652
280463
Bacillota
TTT
Lys
>WENV084948
BABB01000021
280463
Bacillota
TTT
Lys
>WENV084969
BABB01000151
280486
Bacillota
TGC
Ala
>WENV085056
BABB01001440
280486
Bacillota
TGC
Ala
>WENV085106
BABB01003643
280486
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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