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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV085764
BABD01010042
398829
Bacteroidota
CCT
Arg
>WENV085460
BABD01000065
280557
Bacteroidota
CAT
Met
>WENV085461
BABD01000065
280557
Bacteroidota
CAT
Met
>WENV085908
BABD01031657
20206
Bacteroidota
GGA
Ser
>WENV085678
BABD01005476
282712
Bacteroidota
TTT
Lys
>WENV085478
BABD01000174
56493
Bacteroidota
TGA
Ser
>WENV085490
BABD01000219
56493
Bacteroidota
TGA
Ser
>WENV085674
BABD01005071
118089
Bacteroidota
TAG
Leu
>WENV085776
BABD01011786
203954
Bacteroidota
GTC
Asp
>WENV085655
BABD01003880
203954
Bacteroidota
GTC
Asp
>WENV085469
BABD01000094
182267
Bacteroidota
GTT
Asn
>WENV085468
BABD01000094
182267
Bacteroidota
GTT
Asn
>WENV085467
BABD01000094
182267
Bacteroidota
GTT
Asn
>WENV085863
BABD01021899
20449
Bacteroidota
GGA
Ser
>WENV085742
BABD01009348
20449
Bacteroidota
GGA
Ser
>WENV085696
BABD01006818
231777
Bacteroidota
GAT
Ile
>WENV085470
BABD01000107
56072
Bacteroidota
TAA
Leu
>WENV085476
BABD01000174
57807
Bacteroidota
TGA
Ser
>WENV085670
BABD01004632
57807
Bacteroidota
TGA
Ser
>WENV085698
BABD01006878
99847
Bacteroidota
GTA
Tyr
>WENV085937
BABD01036206
399200
Bacteroidota
CAT
Met
>WENV085572
BABD01001207
399200
Bacteroidota
CAT
Met
>WENV085815
BABD01016374
332896
Bacteroidota
TTT
Lys
>WENV085874
BABD01023697
332896
Bacteroidota
TTT
Lys
>WENV085732
BABD01009097
280478
Bacteroidota
GCC
Gly
>WENV085593
BABD01001615
158068
Bacteroidota
GGG
Pro
>WENV085871
BABD01023497
186142
Bacteroidota
GAT
Ile
>WENV085823
BABD01017677
398828
Bacteroidota
CCG
Arg
>WENV085495
BABD01000332
140771
Bacteroidota
>WENV085498
BABD01000332
140771
Bacteroidota
>WENV085614
BABD01002369
176192
Bacteroidota
TCT
Arg
>WENV085524
BABD01000500
280446
Bacteroidota
TTT
Lys
>WENV085457
BABD01000043
280446
Bacteroidota
TTT
Lys
>WENV085870
BABD01023497
186143
Bacteroidota
TGC
Ala
>WENV085479
BABD01000182
398836
Bacteroidota
GCA
Cys
>WENV085480
BABD01000182
398836
Bacteroidota
GCA
Cys
>WENV085722
BABD01008256
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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