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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170022568
BCQK01021399
178510
Alphaproteobacteria
ACG
Arg
>WENV170022503
BCQK01016260
400387
Alphaproteobacteria
GGT
Thr
>WENV170022605
BCQK01025793
205752
Alphaproteobacteria
CAT
Met
>WENV170022993
BCQK01096792
481268
Alphaproteobacteria
TCC
Gly
>WENV170022641
BCQK01029235
100185
Alphaproteobacteria
GAG
Leu
>WENV170022340
BCQK01006002
399480
Alphaproteobacteria
GAA
Phe
>WENV170023029
BCQK01107479
399480
Alphaproteobacteria
GAA
Phe
>WENV170023080
BCQK01121096
399480
Alphaproteobacteria
GAA
Phe
>WENV170023194
BCQK01154983
399480
Alphaproteobacteria
GAA
Phe
>WENV170023345
BCQK01232132
399480
Alphaproteobacteria
GAA
Phe
>WENV170023341
BCQK01230624
487436
Alphaproteobacteria
TCC
Gly
>WENV170022457
BCQK01012312
281659
Alphaproteobacteria
TGC
Ala
>WENV170022633
BCQK01028047
281659
Alphaproteobacteria
TGC
Ala
>WENV170023264
BCQK01189210
281659
Alphaproteobacteria
TGC
Ala
>WENV170022559
BCQK01020297
400384
Alphaproteobacteria
TTC
Glu
>WENV170022915
BCQK01076539
78115
Alphaproteobacteria
GAG
Leu
>WENV170022288
BCQK01003987
282977
Alphaproteobacteria
CAT
Met
>WENV170022597
BCQK01024345
118235
Alphaproteobacteria
TAG
Leu
>WENV170022700
BCQK01037371
400514
Alphaproteobacteria
TTG
Gln
>WENV170022837
BCQK01058527
180029
Alphaproteobacteria
CAT
Met
>WENV170023050
BCQK01112152
405688
Alphaproteobacteria
GTT
Asn
>WENV170023229
BCQK01169997
405688
Alphaproteobacteria
GTT
Asn
>WENV170022294
BCQK01004303
32420
Alphaproteobacteria
CGA
Ser
>WENV170022737
BCQK01042992
178509
Alphaproteobacteria
CCT
Arg
>WENV170023325
BCQK01223053
178509
Alphaproteobacteria
CCT
Arg
>WENV170023056
BCQK01112716
29729
Alphaproteobacteria
GCT
Ser
>WENV170023221
BCQK01165884
29729
Alphaproteobacteria
GCT
Ser
>WENV170023107
BCQK01128559
192131
Alphaproteobacteria
GTC
Asp
>WENV170022573
BCQK01021972
281409
Alphaproteobacteria
TTT
Lys
>WENV170022575
BCQK01022058
102146
Alphaproteobacteria
GTA
Tyr
>WENV170022539
BCQK01018772
178503
Alphaproteobacteria
GGG
Pro
>WENV170022855
BCQK01061372
178503
Alphaproteobacteria
GGG
Pro
>WENV170022906
BCQK01075263
178503
Alphaproteobacteria
GGG
Pro
>WENV170022974
BCQK01092778
178503
Alphaproteobacteria
GGG
Pro
>WENV170022552
BCQK01019779
281650
Alphaproteobacteria
CCA
Trp
>WENV170022307
BCQK01004572
283256
Alphaproteobacteria
CGT
Thr
>WENV170022740
BCQK01043361
178728
Alphaproteobacteria
CGG
Pro
>WENV170022177
BCQK01001230
398994
Alphaproteobacteria
GTT
Asn
>WENV170022657
BCQK01031033
398994
Alphaproteobacteria
GTT
Asn
>WENV170023323
BCQK01222589
398994
Alphaproteobacteria
GTT
Asn
>WENV170023067
BCQK01116098
179720
Alphaproteobacteria
TGG
Pro
>WENV170023072
BCQK01117911
29495
Alphaproteobacteria
GCT
Ser
>WENV170022449
BCQK01011851
29495
Alphaproteobacteria
GCT
Ser
>WENV170022731
BCQK01041467
281676
Alphaproteobacteria
TAC
Val
>WENV170022933
BCQK01080634
281676
Alphaproteobacteria
TAC
Val
>WENV170023024
BCQK01105294
281676
Alphaproteobacteria
TAC
Val
>WENV170022574
BCQK01022010
413432
Alphaproteobacteria
GGT
Thr
>WENV170022892
BCQK01072644
413432
Alphaproteobacteria
GGT
Thr
>WENV170023296
BCQK01205914
179724
Alphaproteobacteria
ACG
Arg
>WENV170022326
BCQK01005541
179724
Alphaproteobacteria
ACG
Arg
>WENV170022555
BCQK01020070
121990
Alphaproteobacteria
TAG
Leu
>WENV170022949
BCQK01084628
121990
Alphaproteobacteria
TAG
Leu
>WENV170022883
BCQK01069449
481099
Alphaproteobacteria
TCC
Gly
>WENV170022205
BCQK01001574
283255
Alphaproteobacteria
GGC
Ala
>WENV170022918
BCQK01076724
411290
Alphaproteobacteria
CAC
Val
>WENV170023266
BCQK01190364
411290
Alphaproteobacteria
CAC
Val
>WENV170022973
BCQK01092097
398996
Alphaproteobacteria
GCC
Gly
>WENV170022331
BCQK01005809
283257
Alphaproteobacteria
TTT
Lys
>WENV170023326
BCQK01224359
283257
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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