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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
78 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170024599
BCQL01082445
190614
Alphaproteobacteria
TGG
Pro
>WENV170024536
BCQL01071995
446430
Alphaproteobacteria
CAC
Val
>WENV170024248
BCQL01032716
290029
Alphaproteobacteria
TGT
Thr
>WENV170023750
BCQL01002336
29841
Alphaproteobacteria
GGA
Ser
>WENV170024422
BCQL01058033
29841
Alphaproteobacteria
GGA
Ser
>WENV170025019
BCQL01184164
29841
Alphaproteobacteria
GGA
Ser
>WENV170025066
BCQL01199986
29841
Alphaproteobacteria
GGA
Ser
>WENV170024120
BCQL01021614
140876
Alphaproteobacteria
>WENV170024443
BCQL01061844
140876
Alphaproteobacteria
>WENV170025099
BCQL01210849
140876
Alphaproteobacteria
>WENV170023921
BCQL01009773
179390
Alphaproteobacteria
TGG
Pro
>WENV170023899
BCQL01009149
178725
Alphaproteobacteria
GTG
His
>WENV170024256
BCQL01034157
201940
Alphaproteobacteria
CAT
Met
>WENV170024105
BCQL01020126
100185
Alphaproteobacteria
GAG
Leu
>WENV170024403
BCQL01054448
399480
Alphaproteobacteria
GAA
Phe
>WENV170024566
BCQL01076140
399480
Alphaproteobacteria
GAA
Phe
>WENV170024800
BCQL01130509
399480
Alphaproteobacteria
GAA
Phe
>WENV170024904
BCQL01155708
399480
Alphaproteobacteria
GAA
Phe
>WENV170023757
BCQL01002668
487436
Alphaproteobacteria
TCC
Gly
>WENV170024360
BCQL01047222
281659
Alphaproteobacteria
TGC
Ala
>WENV170024686
BCQL01098535
400384
Alphaproteobacteria
TTC
Glu
>WENV170024798
BCQL01130254
400384
Alphaproteobacteria
TTC
Glu
>WENV170024332
BCQL01043617
439135
Alphaproteobacteria
CAC
Val
>WENV170023880
BCQL01007506
178729
Alphaproteobacteria
TGG
Pro
>WENV170023896
BCQL01008861
400514
Alphaproteobacteria
TTG
Gln
>WENV170024761
BCQL01119358
400514
Alphaproteobacteria
TTG
Gln
>WENV170023847
BCQL01005601
180029
Alphaproteobacteria
CAT
Met
>WENV170023994
BCQL01014011
180029
Alphaproteobacteria
CAT
Met
>WENV170024618
BCQL01085602
180029
Alphaproteobacteria
CAT
Met
>WENV170024012
BCQL01015454
181950
Alphaproteobacteria
TCT
Arg
>WENV170024374
BCQL01049266
427571
Alphaproteobacteria
GCC
Gly
>WENV170024559
BCQL01075042
179941
Alphaproteobacteria
CAT
Met
>WENV170024387
BCQL01051925
100184
Alphaproteobacteria
CAG
Leu
>WENV170025341
BCQL01289940
178503
Alphaproteobacteria
GGG
Pro
>WENV170025026
BCQL01186292
178503
Alphaproteobacteria
GGG
Pro
>WENV170024682
BCQL01097257
178503
Alphaproteobacteria
GGG
Pro
>WENV170024532
BCQL01071453
178503
Alphaproteobacteria
GGG
Pro
>WENV170023802
BCQL01004130
178503
Alphaproteobacteria
GGG
Pro
>WENV170024066
BCQL01017817
178503
Alphaproteobacteria
GGG
Pro
>WENV170023576
BCQL01000017
283510
Alphaproteobacteria
TTT
Lys
>WENV170024514
BCQL01070391
283510
Alphaproteobacteria
TTT
Lys
>WENV170024597
BCQL01081864
283510
Alphaproteobacteria
TTT
Lys
>WENV170025032
BCQL01188954
283510
Alphaproteobacteria
TTT
Lys
>WENV170024187
BCQL01028983
76223
Alphaproteobacteria
CAG
Leu
>WENV170024131
BCQL01022705
482561
Alphaproteobacteria
TCC
Gly
>WENV170023712
BCQL01001572
156125
Alphaproteobacteria
TCT
Arg
>WENV170023911
BCQL01009450
283256
Alphaproteobacteria
CGT
Thr
>WENV170025202
BCQL01250514
432650
Alphaproteobacteria
GAA
Phe
>WENV170024007
BCQL01015235
432650
Alphaproteobacteria
GAA
Phe
>WENV170024397
BCQL01053706
400515
Alphaproteobacteria
GAC
Val
>WENV170023733
BCQL01002045
102996
Alphaproteobacteria
TAA
Leu
>WENV170024781
BCQL01125423
179720
Alphaproteobacteria
TGG
Pro
>WENV170023587
BCQL01000106
179720
Alphaproteobacteria
TGG
Pro
>WENV170025286
BCQL01278397
399000
Alphaproteobacteria
TTC
Glu
>WENV170023815
BCQL01004992
29495
Alphaproteobacteria
GCT
Ser
>WENV170024101
BCQL01019988
29495
Alphaproteobacteria
GCT
Ser
>WENV170025285
BCQL01278392
281676
Alphaproteobacteria
TAC
Val
>WENV170024773
BCQL01122546
281676
Alphaproteobacteria
TAC
Val
>WENV170024702
BCQL01102207
281676
Alphaproteobacteria
TAC
Val
>WENV170024425
BCQL01059329
281676
Alphaproteobacteria
TAC
Val
>WENV170023721
BCQL01001753
179724
Alphaproteobacteria
ACG
Arg
>WENV170024860
BCQL01143194
179724
Alphaproteobacteria
ACG
Arg
>WENV170023998
BCQL01014136
121990
Alphaproteobacteria
TAG
Leu
>WENV170025007
BCQL01180539
121990
Alphaproteobacteria
TAG
Leu
>WENV170024411
BCQL01056421
481099
Alphaproteobacteria
TCC
Gly
>WENV170025188
BCQL01246642
283255
Alphaproteobacteria
GGC
Ala
>WENV170024933
BCQL01164409
283255
Alphaproteobacteria
GGC
Ala
>WENV170024859
BCQL01142917
283255
Alphaproteobacteria
GGC
Ala
>WENV170023800
BCQL01003960
283255
Alphaproteobacteria
GGC
Ala
>WENV170023976
BCQL01012849
283255
Alphaproteobacteria
GGC
Ala
>WENV170024766
BCQL01120976
283255
Alphaproteobacteria
GGC
Ala
>WENV170025184
BCQL01245244
428327
Alphaproteobacteria
GCC
Gly
>WENV170024981
BCQL01176089
428327
Alphaproteobacteria
GCC
Gly
>WENV170023635
BCQL01000429
428327
Alphaproteobacteria
GCC
Gly
>WENV170024606
BCQL01083462
428327
Alphaproteobacteria
GCC
Gly
>WENV170023898
BCQL01009148
398996
Alphaproteobacteria
GCC
Gly
>WENV170024908
BCQL01158136
283257
Alphaproteobacteria
TTT
Lys
>WENV170024506
BCQL01069679
305449
Alphaproteobacteria
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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