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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
134 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170026693
CDTY01003609
99852
Bacillota
GTA
Tyr
>WENV170027404
CDTY01030167
99852
Bacillota
GTA
Tyr
>WENV170027551
CDTY01035769
99852
Bacillota
GTA
Tyr
>WENV170027186
CDTY01021576
234991
Bacillota
GAT
Ile
>WENV170026626
CDTY01000890
349107
Bacillota
GCC
Gly
>WENV170026686
CDTY01003608
349107
Bacillota
GCC
Gly
>WENV170026690
CDTY01003608
349107
Bacillota
GCC
Gly
>WENV170027172
CDTY01021056
349107
Bacillota
GCC
Gly
>WENV170027185
CDTY01021381
349107
Bacillota
GCC
Gly
>WENV170027564
CDTY01037015
349107
Bacillota
GCC
Gly
>WENV170027576
CDTY01037785
349107
Bacillota
GCC
Gly
>WENV170027710
CDTY01042284
349107
Bacillota
GCC
Gly
>WENV170027712
CDTY01042284
349107
Bacillota
GCC
Gly
>WENV170027565
CDTY01037015
405363
Bacillota
GCA
Cys
>WENV170027713
CDTY01042284
405363
Bacillota
GCA
Cys
>WENV170026625
CDTY01000890
280428
Bacillota
GAA
Phe
>WENV170026689
CDTY01003608
280428
Bacillota
GAA
Phe
>WENV170027184
CDTY01021381
280428
Bacillota
GAA
Phe
>WENV170027709
CDTY01042284
280428
Bacillota
GAA
Phe
>WENV170027832
CDTY01047063
280428
Bacillota
GAA
Phe
>WENV170027437
CDTY01031124
179917
Bacillota
CAT
Met
>WENV170027173
CDTY01021056
280466
Bacillota
TAC
Val
>WENV170026687
CDTY01003608
280466
Bacillota
TAC
Val
>WENV170027887
CDTY01049216
175842
Bacillota
CAC
Val
>WENV170027620
CDTY01039420
175842
Bacillota
CAC
Val
>WENV170027241
CDTY01023774
175842
Bacillota
CAC
Val
>WENV170027689
CDTY01041787
291629
Bacillota
CCA
Trp
>WENV170027667
CDTY01041333
236579
Bacillota
GAT
Ile
>WENV170027842
CDTY01047452
348419
Bacillota
GTT
Asn
>WENV170027629
CDTY01040393
215243
Bacillota
CAT
Met
>WENV170026752
CDTY01006221
215243
Bacillota
CAT
Met
>WENV170026600
CDTY01000048
190476
Bacillota
CAT
Met
>WENV170027932
CDTY01051022
280447
Bacillota
GAC
Val
>WENV170027888
CDTY01049216
280447
Bacillota
GAC
Val
>WENV170027020
CDTY01015549
280447
Bacillota
GAC
Val
>WENV170026614
CDTY01000866
280447
Bacillota
GAC
Val
>WENV170027872
CDTY01048772
5692
Bacillota
GCT
Ser
>WENV170027287
CDTY01025407
5692
Bacillota
GCT
Ser
>WENV170026633
CDTY01001339
312274
Bacillota
GGC
Ala
>WENV170027766
CDTY01044178
186123
Bacillota
GTC
Asp
>WENV170027691
CDTY01041787
186123
Bacillota
GTC
Asp
>WENV170027687
CDTY01041787
186123
Bacillota
GTC
Asp
>WENV170027994
CDTY01053228
284723
Bacillota
TAC
Val
>WENV170027992
CDTY01053228
284723
Bacillota
TAC
Val
>WENV170027716
CDTY01042364
284723
Bacillota
TAC
Val
>WENV170027714
CDTY01042364
284723
Bacillota
TAC
Val
>WENV170027434
CDTY01031124
284723
Bacillota
TAC
Val
>WENV170027828
CDTY01046767
73009
Bacillota
CAG
Leu
>WENV170027403
CDTY01030167
73009
Bacillota
CAG
Leu
>WENV170026861
CDTY01009371
73009
Bacillota
CAG
Leu
>WENV170027863
CDTY01048315
291581
Bacillota
CGG
Pro
>WENV170026886
CDTY01010663
291581
Bacillota
CGG
Pro
>WENV170026718
CDTY01005290
291581
Bacillota
CGG
Pro
>WENV170027826
CDTY01046767
175859
Bacillota
TCT
Arg
>WENV170027563
CDTY01036982
175859
Bacillota
TCT
Arg
>WENV170027463
CDTY01031916
175859
Bacillota
TCT
Arg
>WENV170027483
CDTY01032757
175831
Bacillota
ACG
Arg
>WENV170027340
CDTY01027914
175831
Bacillota
ACG
Arg
>WENV170026682
CDTY01003564
175831
Bacillota
ACG
Arg
>WENV170026602
CDTY01000048
175831
Bacillota
ACG
Arg
>WENV170027102
CDTY01018560
332181
Bacillota
TGT
Thr
>WENV170027767
CDTY01044178
291634
Bacillota
GAA
Phe
>WENV170027692
CDTY01041787
291634
Bacillota
GAA
Phe
>WENV170027607
CDTY01038780
346451
Bacillota
TTT
Lys
>WENV170027299
CDTY01025762
346451
Bacillota
TTT
Lys
>WENV170028057
CDTY01055436
295350
Bacillota
TGC
Ala
>WENV170027862
CDTY01048315
480322
Bacillota
CTG
Gln
>WENV170027267
CDTY01024602
480322
Bacillota
CTG
Gln
>WENV170027174
CDTY01021068
480322
Bacillota
CTG
Gln
>WENV170026977
CDTY01014179
480322
Bacillota
CTG
Gln
>WENV170026885
CDTY01010663
480322
Bacillota
CTG
Gln
>WENV170026853
CDTY01009237
480322
Bacillota
CTG
Gln
>WENV170026818
CDTY01008035
480322
Bacillota
CTG
Gln
>WENV170026717
CDTY01005290
480322
Bacillota
CTG
Gln
>WENV170028053
CDTY01055381
175868
Bacillota
GTT
Asn
>WENV170027874
CDTY01048772
175868
Bacillota
GTT
Asn
>WENV170027837
CDTY01047105
175868
Bacillota
GTT
Asn
>WENV170027228
CDTY01023286
175868
Bacillota
GTT
Asn
>WENV170026701
CDTY01004042
175868
Bacillota
GTT
Asn
>WENV170026694
CDTY01003609
175868
Bacillota
GTT
Asn
>WENV170027860
CDTY01048284
322848
Bacillota
CTT
Lys
>WENV170027191
CDTY01021905
322848
Bacillota
CTT
Lys
>WENV170026792
CDTY01007032
322848
Bacillota
CTT
Lys
>WENV170026685
CDTY01003574
322848
Bacillota
CTT
Lys
>WENV170027873
CDTY01048772
398854
Bacillota
CTC
Glu
>WENV170027859
CDTY01048284
398854
Bacillota
CTC
Glu
>WENV170027836
CDTY01047105
398854
Bacillota
CTC
Glu
>WENV170027227
CDTY01023286
398854
Bacillota
CTC
Glu
>WENV170026817
CDTY01007684
398854
Bacillota
CTC
Glu
>WENV170026684
CDTY01003574
398854
Bacillota
CTC
Glu
>WENV170027753
CDTY01044083
291576
Bacillota
CCC
Gly
>WENV170026923
CDTY01012396
291576
Bacillota
CCC
Gly
>WENV170026691
CDTY01003608
291576
Bacillota
CCC
Gly
>WENV170027784
CDTY01045367
480324
Bacillota
TTG
Gln
>WENV170026957
CDTY01013150
480324
Bacillota
TTG
Gln
>WENV170026605
CDTY01000152
480324
Bacillota
TTG
Gln
>WENV170027433
CDTY01031124
175899
Bacillota
GTC
Asp
>WENV170026980
CDTY01014528
175899
Bacillota
GTC
Asp
>WENV170026676
CDTY01002974
303718
Bacillota
TGT
Thr
>WENV170027746
CDTY01043635
175911
Bacillota
GTC
Asp
>WENV170027376
CDTY01028841
175911
Bacillota
GTC
Asp
>WENV170026658
CDTY01002249
398857
Bacillota
TTC
Glu
>WENV170027156
CDTY01019941
280444
Bacillota
GGT
Thr
>WENV170026961
CDTY01013192
280444
Bacillota
GGT
Thr
>WENV170026960
CDTY01013192
280444
Bacillota
GGT
Thr
>WENV170026852
CDTY01009229
280444
Bacillota
GGT
Thr
>WENV170026700
CDTY01004021
280444
Bacillota
GGT
Thr
>WENV170026712
CDTY01004512
321753
Bacillota
GCC
Gly
>WENV170027505
CDTY01033735
321753
Bacillota
GCC
Gly
>WENV170028026
CDTY01054318
179755
Bacillota
CCG
Arg
>WENV170026604
CDTY01000048
179755
Bacillota
CCG
Arg
>WENV170027187
CDTY01021576
291650
Bacillota
TGC
Ala
>WENV170026954
CDTY01012962
398832
Bacillota
TTC
Glu
>WENV170026601
CDTY01000048
398832
Bacillota
TTC
Glu
>WENV170027750
CDTY01044066
201856
Bacillota
GAT
Ile
>WENV170027352
CDTY01028331
201856
Bacillota
GAT
Ile
>WENV170027105
CDTY01018560
289123
Bacillota
GGT
Thr
>WENV170027275
CDTY01025000
175857
Bacillota
GTG
His
>WENV170027622
CDTY01039657
398833
Bacillota
TGT
Thr
>WENV170027550
CDTY01035769
398833
Bacillota
TGT
Thr
>WENV170026692
CDTY01003609
398833
Bacillota
TGT
Thr
>WENV170027711
CDTY01042284
175849
Bacillota
GTC
Asp
>WENV170026959
CDTY01013192
175849
Bacillota
GTC
Asp
>WENV170026851
CDTY01009229
175849
Bacillota
GTC
Asp
>WENV170026688
CDTY01003608
175849
Bacillota
GTC
Asp
>WENV170026627
CDTY01000890
175849
Bacillota
GTC
Asp
>WENV170027693
CDTY01041787
405393
Bacillota
GCC
Gly
>WENV170027688
CDTY01041787
405393
Bacillota
GCC
Gly
>WENV170027313
CDTY01026974
405393
Bacillota
GCC
Gly
>WENV170027921
CDTY01050221
56074
Bacillota
TGA
Ser
>WENV170026774
CDTY01006613
56074
Bacillota
TGA
Ser
>WENV170027871
CDTY01048772
56074
Bacillota
TGA
Ser
>WENV170027861
CDTY01048315
280473
Bacillota
TGG
Pro
>WENV170027659
CDTY01040833
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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