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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170028079
CDYE01000221
287289
Bacillota
GCC
Gly
>WENV170028173
CDYE01003016
287289
Bacillota
GCC
Gly
>WENV170028167
CDYE01002666
407726
Bacillota
CTG
Gln
>WENV170028323
CDYE01007378
407726
Bacillota
CTG
Gln
>WENV170028324
CDYE01007378
407726
Bacillota
CTG
Gln
>WENV170028115
CDYE01001229
398835
Bacillota
GCC
Gly
>WENV170028331
CDYE01007720
398835
Bacillota
GCC
Gly
>WENV170028389
CDYE01008916
398835
Bacillota
GCC
Gly
>WENV170028073
CDYE01000197
73638
Bacillota
AAG
Leu
>WENV170028081
CDYE01000263
73638
Bacillota
AAG
Leu
>WENV170028143
CDYE01002235
73638
Bacillota
AAG
Leu
>WENV170028077
CDYE01000221
175911
Bacillota
GTC
Asp
>WENV170028405
CDYE01009308
175911
Bacillota
GTC
Asp
>WENV170028248
CDYE01005817
292374
Bacillota
TGC
Ala
>WENV170028183
CDYE01003503
280486
Bacillota
TGC
Ala
>WENV170028370
CDYE01008486
280486
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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