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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170028088
CDYE01000734
398829
Bacteroidota
CCT
Arg
>WENV170028421
CDYE01009795
175904
Bacteroidota
CGG
Pro
>WENV170028109
CDYE01001070
20492
Bacteroidota
GGA
Ser
>WENV170028397
CDYE01009094
20492
Bacteroidota
GGA
Ser
>WENV170028225
CDYE01004646
282712
Bacteroidota
TTT
Lys
>WENV170028117
CDYE01001245
118089
Bacteroidota
TAG
Leu
>WENV170028359
CDYE01008275
398872
Bacteroidota
GGT
Thr
>WENV170028308
CDYE01006989
175908
Bacteroidota
GTC
Asp
>WENV170028230
CDYE01004796
175908
Bacteroidota
GTC
Asp
>WENV170028440
CDYE01010519
29791
Bacteroidota
GCT
Ser
>WENV170028429
CDYE01010073
29791
Bacteroidota
GCT
Ser
>WENV170028228
CDYE01004707
29791
Bacteroidota
GCT
Ser
>WENV170028148
CDYE01002427
29791
Bacteroidota
GCT
Ser
>WENV170028156
CDYE01002488
20449
Bacteroidota
GGA
Ser
>WENV170028063
CDYE01000107
57807
Bacteroidota
TGA
Ser
>WENV170028068
CDYE01000193
57807
Bacteroidota
TGA
Ser
>WENV170028084
CDYE01000555
57807
Bacteroidota
TGA
Ser
>WENV170028329
CDYE01007619
57807
Bacteroidota
TGA
Ser
>WENV170028441
CDYE01010519
398860
Bacteroidota
CTC
Glu
>WENV170028430
CDYE01010073
398860
Bacteroidota
CTC
Glu
>WENV170028229
CDYE01004707
398860
Bacteroidota
CTC
Glu
>WENV170028149
CDYE01002427
398860
Bacteroidota
CTC
Glu
>WENV170028075
CDYE01000218
99847
Bacteroidota
GTA
Tyr
>WENV170028337
CDYE01007857
399200
Bacteroidota
CAT
Met
>WENV170028336
CDYE01007857
399200
Bacteroidota
CAT
Met
>WENV170028070
CDYE01000195
280478
Bacteroidota
GCC
Gly
>WENV170028072
CDYE01000195
280478
Bacteroidota
GCC
Gly
>WENV170028159
CDYE01002488
280478
Bacteroidota
GCC
Gly
>WENV170028161
CDYE01002488
280478
Bacteroidota
GCC
Gly
>WENV170028163
CDYE01002488
280478
Bacteroidota
GCC
Gly
>WENV170028286
CDYE01006356
280478
Bacteroidota
GCC
Gly
>WENV170028262
CDYE01006126
175844
Bacteroidota
GGC
Ala
>WENV170028307
CDYE01006988
158068
Bacteroidota
GGG
Pro
>WENV170028062
CDYE01000099
158068
Bacteroidota
GGG
Pro
>WENV170028447
CDYE01010664
176192
Bacteroidota
TCT
Arg
>WENV170028444
CDYE01010657
176192
Bacteroidota
TCT
Arg
>WENV170028099
CDYE01000798
176192
Bacteroidota
TCT
Arg
>WENV170028112
CDYE01001145
400088
Bacteroidota
GGT
Thr
>WENV170028172
CDYE01002947
484496
Bacteroidota
TTG
Gln
>WENV170028141
CDYE01002157
484496
Bacteroidota
TTG
Gln
>WENV170028448
CDYE01010664
285750
Bacteroidota
CCC
Gly
>WENV170028293
CDYE01006601
398836
Bacteroidota
GCA
Cys
>WENV170028317
CDYE01007139
398836
Bacteroidota
GCA
Cys
>WENV170028446
CDYE01010661
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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