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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
64 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170029292
CDYG01000728
117741
Bacteroidota
TAG
Leu
>WENV170029608
CDYG01028991
398829
Bacteroidota
CCT
Arg
>WENV170029640
CDYG01032347
398829
Bacteroidota
CCT
Arg
>WENV170029561
CDYG01024761
175838
Bacteroidota
GTT
Asn
>WENV170029562
CDYG01024761
175838
Bacteroidota
GTT
Asn
>WENV170029465
CDYG01015058
289031
Bacteroidota
CAT
Met
>WENV170029512
CDYG01019762
289031
Bacteroidota
CAT
Met
>WENV170029543
CDYG01023388
289031
Bacteroidota
CAT
Met
>WENV170029601
CDYG01028281
289031
Bacteroidota
CAT
Met
>WENV170029633
CDYG01031807
289031
Bacteroidota
CAT
Met
>WENV170029721
CDYG01038996
289031
Bacteroidota
CAT
Met
>WENV170029618
CDYG01029367
280557
Bacteroidota
CAT
Met
>WENV170029300
CDYG01001066
20206
Bacteroidota
GGA
Ser
>WENV170029304
CDYG01001419
483416
Bacteroidota
CTG
Gln
>WENV170029656
CDYG01033792
201819
Bacteroidota
CAT
Met
>WENV170029655
CDYG01033792
201819
Bacteroidota
CAT
Met
>WENV170029461
CDYG01014551
56493
Bacteroidota
TGA
Ser
>WENV170029337
CDYG01004348
56493
Bacteroidota
TGA
Ser
>WENV170029768
CDYG01043568
175903
Bacteroidota
GTG
His
>WENV170029619
CDYG01029369
351598
Bacteroidota
CGG
Pro
>WENV170029555
CDYG01024026
351598
Bacteroidota
CGG
Pro
>WENV170029384
CDYG01008662
351598
Bacteroidota
CGG
Pro
>WENV170029464
CDYG01014995
405877
Bacteroidota
GGT
Thr
>WENV170029453
CDYG01014134
21127
Bacteroidota
GGA
Ser
>WENV170029624
CDYG01030076
56072
Bacteroidota
TAA
Leu
>WENV170029564
CDYG01024761
56072
Bacteroidota
TAA
Leu
>WENV170029675
CDYG01035970
57807
Bacteroidota
TGA
Ser
>WENV170029523
CDYG01021499
57807
Bacteroidota
TGA
Ser
>WENV170029293
CDYG01000730
57807
Bacteroidota
TGA
Ser
>WENV170029615
CDYG01029329
175902
Bacteroidota
GGC
Ala
>WENV170029519
CDYG01020444
280451
Bacteroidota
CGT
Thr
>WENV170029302
CDYG01001360
280451
Bacteroidota
CGT
Thr
>WENV170029697
CDYG01037383
99847
Bacteroidota
GTA
Tyr
>WENV170029566
CDYG01024761
99847
Bacteroidota
GTA
Tyr
>WENV170029440
CDYG01013017
99847
Bacteroidota
GTA
Tyr
>WENV170029334
CDYG01003624
399200
Bacteroidota
CAT
Met
>WENV170029629
CDYG01031221
399200
Bacteroidota
CAT
Met
>WENV170029719
CDYG01038896
186874
Bacteroidota
CAT
Met
>WENV170029516
CDYG01020138
186874
Bacteroidota
CAT
Met
>WENV170029299
CDYG01001066
488746
Bacteroidota
CTG
Gln
>WENV170029797
CDYG01045278
20766
Bacteroidota
GGA
Ser
>WENV170029294
CDYG01000731
158068
Bacteroidota
GGG
Pro
>WENV170029578
CDYG01025503
158068
Bacteroidota
GGG
Pro
>WENV170029670
CDYG01035223
398828
Bacteroidota
CCG
Arg
>WENV170029306
CDYG01001768
398828
Bacteroidota
CCG
Arg
>WENV170029517
CDYG01020208
74084
Bacteroidota
CAG
Leu
>WENV170029318
CDYG01003053
480325
Bacteroidota
CTG
Gln
>WENV170029779
CDYG01044205
140771
Bacteroidota
>WENV170029776
CDYG01044205
140771
Bacteroidota
>WENV170029478
CDYG01016725
140771
Bacteroidota
>WENV170029475
CDYG01016725
140771
Bacteroidota
>WENV170029382
CDYG01008327
140771
Bacteroidota
>WENV170029379
CDYG01008327
140771
Bacteroidota
>WENV170029585
CDYG01026592
280446
Bacteroidota
TTT
Lys
>WENV170029534
CDYG01022644
280446
Bacteroidota
TTT
Lys
>WENV170029521
CDYG01020808
484496
Bacteroidota
TTG
Gln
>WENV170029593
CDYG01027422
484496
Bacteroidota
TTG
Gln
>WENV170029607
CDYG01028965
484496
Bacteroidota
TTG
Gln
>WENV170029789
CDYG01044895
365112
Bacteroidota
TTT
Lys
>WENV170029732
CDYG01040282
365112
Bacteroidota
TTT
Lys
>WENV170029425
CDYG01010834
365112
Bacteroidota
TTT
Lys
>WENV170029365
CDYG01006975
365112
Bacteroidota
TTT
Lys
>WENV170029693
CDYG01037213
398836
Bacteroidota
GCA
Cys
>WENV170029297
CDYG01001064
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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