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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170029994
CDYH01010598
99852
Bacillota
GTA
Tyr
>WENV170030022
CDYH01012301
99852
Bacillota
GTA
Tyr
>WENV170029931
CDYH01006551
280500
Bacillota
TGC
Ala
>WENV170029975
CDYH01009314
280500
Bacillota
TGC
Ala
>WENV170029950
CDYH01007935
405363
Bacillota
GCA
Cys
>WENV170029893
CDYH01005603
175842
Bacillota
CAC
Val
>WENV170029997
CDYH01010896
175842
Bacillota
CAC
Val
>WENV170029846
CDYH01002875
280447
Bacillota
GAC
Val
>WENV170029971
CDYH01008879
280447
Bacillota
GAC
Val
>WENV170029861
CDYH01003673
5692
Bacillota
GCT
Ser
>WENV170030021
CDYH01012283
175825
Bacillota
GAT
Ile
>WENV170030065
CDYH01016985
73009
Bacillota
CAG
Leu
>WENV170030036
CDYH01013426
175859
Bacillota
TCT
Arg
>WENV170029986
CDYH01009661
175831
Bacillota
ACG
Arg
>WENV170029930
CDYH01006551
175916
Bacillota
GAT
Ile
>WENV170029973
CDYH01009288
27216
Bacillota
GCT
Ser
>WENV170029812
CDYH01001320
480322
Bacillota
CTG
Gln
>WENV170029844
CDYH01002734
175868
Bacillota
GTT
Asn
>WENV170029843
CDYH01002734
398854
Bacillota
CTC
Glu
>WENV170030125
CDYH01023293
291576
Bacillota
CCC
Gly
>WENV170029989
CDYH01010061
179755
Bacillota
CCG
Arg
>WENV170030112
CDYH01021810
398832
Bacillota
TTC
Glu
>WENV170030071
CDYH01017732
398833
Bacillota
TGT
Thr
>WENV170029952
CDYH01007996
175849
Bacillota
GTC
Asp
>WENV170029860
CDYH01003673
56074
Bacillota
TGA
Ser
>WENV170030068
CDYH01017712
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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