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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170031054
CDYI01038332
175907
Actinomycetota
TAC
Val
>WENV170030769
CDYI01027916
140768
Actinomycetota
TAG
Leu
>WENV170030761
CDYI01027354
176075
Actinomycetota
TCT
Arg
>WENV170031482
CDYI01057619
20208
Actinomycetota
GAG
Leu
>WENV170030504
CDYI01015915
59689
Actinomycetota
GGA
Ser
>WENV170030208
CDYI01003859
175837
Actinomycetota
ACG
Arg
>WENV170030207
CDYI01003859
175837
Actinomycetota
ACG
Arg
>WENV170031229
CDYI01046439
29393
Actinomycetota
GCT
Ser
>WENV170030980
CDYI01036060
280549
Actinomycetota
CAC
Val
>WENV170030910
CDYI01033007
280549
Actinomycetota
CAC
Val
>WENV170031495
CDYI01058499
349164
Actinomycetota
CTC
Glu
>WENV170030687
CDYI01024062
176077
Actinomycetota
CAT
Met
>WENV170030809
CDYI01029369
280524
Actinomycetota
TGC
Ala
>WENV170030753
CDYI01026805
150272
Actinomycetota
TAA
Leu
>WENV170031311
CDYI01050093
117777
Actinomycetota
>WENV170031094
CDYI01040183
280544
Actinomycetota
GTG
His
>WENV170031407
CDYI01053478
280496
Actinomycetota
CGT
Thr
>WENV170030919
CDYI01033166
280703
Actinomycetota
CCT
Arg
>WENV170031408
CDYI01053493
184157
Actinomycetota
TGG
Pro
>WENV170030768
CDYI01027916
323758
Actinomycetota
CGT
Thr
>WENV170030143
CDYI01000565
358727
Actinomycetota
CCG
Arg
>WENV170030951
CDYI01034689
99865
Actinomycetota
CAG
Leu
>WENV170031496
CDYI01058499
398853
Actinomycetota
CTG
Gln
>WENV170031089
CDYI01039729
175843
Actinomycetota
CAA
Leu
>WENV170031411
CDYI01053666
56075
Actinomycetota
TGA
Ser
>WENV170030808
CDYI01029369
179238
Actinomycetota
GAT
Ile
>WENV170030219
CDYI01004211
506175
Actinomycetota
TTG
Gln
>WENV170030145
CDYI01000821
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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