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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
77 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170030314
CDYI01008242
349107
Bacillota
GCC
Gly
>WENV170030834
CDYI01029887
349107
Bacillota
GCC
Gly
>WENV170030404
CDYI01012937
405363
Bacillota
GCA
Cys
>WENV170030835
CDYI01029887
405363
Bacillota
GCA
Cys
>WENV170030497
CDYI01015901
229015
Bacillota
GTG
His
>WENV170031386
CDYI01052820
179917
Bacillota
CAT
Met
>WENV170030221
CDYI01004327
280492
Bacillota
CTT
Lys
>WENV170031122
CDYI01042055
280492
Bacillota
CTT
Lys
>WENV170031510
CDYI01058708
175842
Bacillota
CAC
Val
>WENV170031425
CDYI01054539
175842
Bacillota
CAC
Val
>WENV170031519
CDYI01058965
190476
Bacillota
CAT
Met
>WENV170031167
CDYI01044068
190476
Bacillota
CAT
Met
>WENV170030505
CDYI01016231
190476
Bacillota
CAT
Met
>WENV170030623
CDYI01021650
73664
Bacillota
CAG
Leu
>WENV170031231
CDYI01046693
280447
Bacillota
GAC
Val
>WENV170030860
CDYI01030761
280447
Bacillota
GAC
Val
>WENV170030307
CDYI01007653
5692
Bacillota
GCT
Ser
>WENV170031383
CDYI01052820
284723
Bacillota
TAC
Val
>WENV170031317
CDYI01050380
284723
Bacillota
TAC
Val
>WENV170030608
CDYI01020707
284723
Bacillota
TAC
Val
>WENV170030467
CDYI01015248
73009
Bacillota
CAG
Leu
>WENV170031544
CDYI01059772
291581
Bacillota
CGG
Pro
>WENV170031041
CDYI01037902
175859
Bacillota
TCT
Arg
>WENV170030364
CDYI01009858
175859
Bacillota
TCT
Arg
>WENV170030303
CDYI01007577
175831
Bacillota
ACG
Arg
>WENV170030431
CDYI01013425
353153
Bacillota
TGC
Ala
>WENV170030496
CDYI01015901
179810
Bacillota
TCT
Arg
>WENV170030229
CDYI01005086
291634
Bacillota
GAA
Phe
>WENV170030255
CDYI01005944
291634
Bacillota
GAA
Phe
>WENV170031543
CDYI01059772
480322
Bacillota
CTG
Gln
>WENV170030386
CDYI01011956
480322
Bacillota
CTG
Gln
>WENV170030853
CDYI01030427
175868
Bacillota
GTT
Asn
>WENV170030445
CDYI01014359
175868
Bacillota
GTT
Asn
>WENV170031477
CDYI01057427
291576
Bacillota
CCC
Gly
>WENV170031013
CDYI01037140
291576
Bacillota
CCC
Gly
>WENV170030756
CDYI01026910
291576
Bacillota
CCC
Gly
>WENV170030285
CDYI01006889
480324
Bacillota
TTG
Gln
>WENV170030913
CDYI01033134
497729
Bacillota
CCA
Trp
>WENV170030377
CDYI01011127
497729
Bacillota
CCA
Trp
>WENV170030408
CDYI01012973
175899
Bacillota
GTC
Asp
>WENV170030998
CDYI01036664
175899
Bacillota
GTC
Asp
>WENV170030858
CDYI01030650
303718
Bacillota
TGT
Thr
>WENV170031189
CDYI01044846
303718
Bacillota
TGT
Thr
>WENV170030647
CDYI01022485
56079
Bacillota
AAG
Leu
>WENV170030648
CDYI01022485
56079
Bacillota
AAG
Leu
>WENV170030640
CDYI01022464
323864
Bacillota
TGC
Ala
>WENV170030275
CDYI01006367
398857
Bacillota
TTC
Glu
>WENV170030443
CDYI01013931
117745
Bacillota
GTA
Tyr
>WENV170030411
CDYI01012973
117745
Bacillota
GTA
Tyr
>WENV170030781
CDYI01028333
280444
Bacillota
GGT
Thr
>WENV170031424
CDYI01054462
179755
Bacillota
CCG
Arg
>WENV170030612
CDYI01020917
179755
Bacillota
CCG
Arg
>WENV170031520
CDYI01058965
398832
Bacillota
TTC
Glu
>WENV170031168
CDYI01044068
398832
Bacillota
TTC
Glu
>WENV170030506
CDYI01016231
398832
Bacillota
TTC
Glu
>WENV170030515
CDYI01016406
118669
Bacillota
GTA
Tyr
>WENV170030620
CDYI01021510
118669
Bacillota
GTA
Tyr
>WENV170031316
CDYI01050380
175915
Bacillota
GTC
Asp
>WENV170031178
CDYI01044434
175915
Bacillota
GTC
Asp
>WENV170030415
CDYI01012980
280462
Bacillota
GAA
Phe
>WENV170030413
CDYI01012973
280462
Bacillota
GAA
Phe
>WENV170030177
CDYI01001936
398852
Bacillota
CTC
Glu
>WENV170030551
CDYI01018235
398852
Bacillota
CTC
Glu
>WENV170031176
CDYI01044383
398852
Bacillota
CTC
Glu
>WENV170030602
CDYI01020701
184539
Bacillota
TCT
Arg
>WENV170030828
CDYI01029553
175857
Bacillota
GTG
His
>WENV170030190
CDYI01002895
175857
Bacillota
GTG
His
>WENV170031232
CDYI01046749
398833
Bacillota
TGT
Thr
>WENV170030833
CDYI01029887
175849
Bacillota
GTC
Asp
>WENV170030414
CDYI01012973
280463
Bacillota
TTT
Lys
>WENV170030192
CDYI01002895
280463
Bacillota
TTT
Lys
>WENV170031357
CDYI01051432
179166
Bacillota
TCT
Arg
>WENV170030212
CDYI01004130
280486
Bacillota
TGC
Ala
>WENV170030306
CDYI01007653
56074
Bacillota
TGA
Ser
>WENV170030643
CDYI01022471
482078
Bacillota
CCC
Gly
>WENV170031281
CDYI01048933
280473
Bacillota
TGG
Pro
>WENV170030341
CDYI01009134
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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