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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
145 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170030546
CDYI01017766
295385
Bacteroidota
CCA
Trp
>WENV170030726
CDYI01025536
117741
Bacteroidota
TAG
Leu
>WENV170031124
CDYI01042065
117741
Bacteroidota
TAG
Leu
>WENV170031173
CDYI01044364
398829
Bacteroidota
CCT
Arg
>WENV170031196
CDYI01045756
398829
Bacteroidota
CCT
Arg
>WENV170031415
CDYI01053895
398829
Bacteroidota
CCT
Arg
>WENV170031478
CDYI01057477
398829
Bacteroidota
CCT
Arg
>WENV170030166
CDYI01001928
175838
Bacteroidota
GTT
Asn
>WENV170030167
CDYI01001928
175838
Bacteroidota
GTT
Asn
>WENV170031445
CDYI01055315
175838
Bacteroidota
GTT
Asn
>WENV170031446
CDYI01055315
175838
Bacteroidota
GTT
Asn
>WENV170031447
CDYI01055315
175838
Bacteroidota
GTT
Asn
>WENV170030586
CDYI01020528
175904
Bacteroidota
CGG
Pro
>WENV170030631
CDYI01022064
289031
Bacteroidota
CAT
Met
>WENV170031347
CDYI01051387
289031
Bacteroidota
CAT
Met
>WENV170031367
CDYI01052007
280553
Bacteroidota
TTT
Lys
>WENV170031487
CDYI01058036
280557
Bacteroidota
CAT
Met
>WENV170030291
CDYI01007056
280557
Bacteroidota
CAT
Met
>WENV170030142
CDYI01000505
20492
Bacteroidota
GGA
Ser
>WENV170031283
CDYI01049063
20206
Bacteroidota
GGA
Ser
>WENV170031348
CDYI01051387
483416
Bacteroidota
CTG
Gln
>WENV170031250
CDYI01047229
483416
Bacteroidota
CTG
Gln
>WENV170031242
CDYI01046829
483416
Bacteroidota
CTG
Gln
>WENV170031065
CDYI01038732
483416
Bacteroidota
CTG
Gln
>WENV170031107
CDYI01041009
398871
Bacteroidota
TTC
Glu
>WENV170031106
CDYI01041009
398871
Bacteroidota
TTC
Glu
>WENV170030943
CDYI01034324
398871
Bacteroidota
TTC
Glu
>WENV170030942
CDYI01034324
398871
Bacteroidota
TTC
Glu
>WENV170030852
CDYI01030380
398871
Bacteroidota
TTC
Glu
>WENV170031533
CDYI01059412
201819
Bacteroidota
CAT
Met
>WENV170031532
CDYI01059412
201819
Bacteroidota
CAT
Met
>WENV170030465
CDYI01014924
56493
Bacteroidota
TGA
Ser
>WENV170030961
CDYI01035024
175906
Bacteroidota
GTG
His
>WENV170030960
CDYI01035024
175906
Bacteroidota
GTG
His
>WENV170031365
CDYI01051874
175903
Bacteroidota
GTG
His
>WENV170030946
CDYI01034582
175903
Bacteroidota
GTG
His
>WENV170030938
CDYI01034081
175903
Bacteroidota
GTG
His
>WENV170031528
CDYI01059028
351598
Bacteroidota
CGG
Pro
>WENV170031331
CDYI01050645
351598
Bacteroidota
CGG
Pro
>WENV170031324
CDYI01050412
351598
Bacteroidota
CGG
Pro
>WENV170031052
CDYI01038279
351598
Bacteroidota
CGG
Pro
>WENV170030967
CDYI01035478
351598
Bacteroidota
CGG
Pro
>WENV170030926
CDYI01033570
351598
Bacteroidota
CGG
Pro
>WENV170030908
CDYI01032817
351598
Bacteroidota
CGG
Pro
>WENV170030864
CDYI01030939
351598
Bacteroidota
CGG
Pro
>WENV170030720
CDYI01025296
351598
Bacteroidota
CGG
Pro
>WENV170030701
CDYI01024806
351598
Bacteroidota
CGG
Pro
>WENV170030349
CDYI01009240
351598
Bacteroidota
CGG
Pro
>WENV170030363
CDYI01009852
156068
Bacteroidota
TAC
Val
>WENV170030362
CDYI01009852
156068
Bacteroidota
TAC
Val
>WENV170031205
CDYI01045874
156068
Bacteroidota
TAC
Val
>WENV170030876
CDYI01031352
118089
Bacteroidota
TAG
Leu
>WENV170031428
CDYI01054757
118089
Bacteroidota
TAG
Leu
>WENV170031364
CDYI01051861
280530
Bacteroidota
CCA
Trp
>WENV170031039
CDYI01037803
203954
Bacteroidota
GTC
Asp
>WENV170031038
CDYI01037803
203954
Bacteroidota
GTC
Asp
>WENV170030340
CDYI01009053
203954
Bacteroidota
GTC
Asp
>WENV170031264
CDYI01047758
178907
Bacteroidota
TCT
Arg
>WENV170030164
CDYI01001919
178907
Bacteroidota
TCT
Arg
>WENV170030799
CDYI01029052
405877
Bacteroidota
GGT
Thr
>WENV170030794
CDYI01029051
405877
Bacteroidota
GGT
Thr
>WENV170030901
CDYI01032588
29791
Bacteroidota
GCT
Ser
>WENV170030380
CDYI01011617
182267
Bacteroidota
GTT
Asn
>WENV170031448
CDYI01055368
20449
Bacteroidota
GGA
Ser
>WENV170030778
CDYI01028172
20449
Bacteroidota
GGA
Ser
>WENV170030727
CDYI01025710
178133
Bacteroidota
GAT
Ile
>WENV170031194
CDYI01045363
21127
Bacteroidota
GGA
Ser
>WENV170030553
CDYI01018237
56072
Bacteroidota
TAA
Leu
>WENV170030786
CDYI01028639
57807
Bacteroidota
TGA
Ser
>WENV170030539
CDYI01017334
57807
Bacteroidota
TGA
Ser
>WENV170031171
CDYI01044306
175886
Bacteroidota
GGC
Ala
>WENV170030366
CDYI01009875
175902
Bacteroidota
GGC
Ala
>WENV170030694
CDYI01024376
179697
Bacteroidota
TGT
Thr
>WENV170031117
CDYI01041826
398860
Bacteroidota
CTC
Glu
>WENV170030433
CDYI01013455
280451
Bacteroidota
CGT
Thr
>WENV170031455
CDYI01055736
99847
Bacteroidota
GTA
Tyr
>WENV170031282
CDYI01048938
99847
Bacteroidota
GTA
Tyr
>WENV170030424
CDYI01012995
99847
Bacteroidota
GTA
Tyr
>WENV170030169
CDYI01001928
99847
Bacteroidota
GTA
Tyr
>WENV170030153
CDYI01001166
399200
Bacteroidota
CAT
Met
>WENV170030441
CDYI01013925
399200
Bacteroidota
CAT
Met
>WENV170030525
CDYI01016845
399200
Bacteroidota
CAT
Met
>WENV170031104
CDYI01040666
399200
Bacteroidota
CAT
Met
>WENV170031125
CDYI01042098
186874
Bacteroidota
CAT
Met
>WENV170030634
CDYI01022064
186874
Bacteroidota
CAT
Met
>WENV170030406
CDYI01012960
186874
Bacteroidota
CAT
Met
>WENV170030624
CDYI01021654
488746
Bacteroidota
CTG
Gln
>WENV170030155
CDYI01001459
280478
Bacteroidota
GCC
Gly
>WENV170031175
CDYI01044378
280478
Bacteroidota
GCC
Gly
>WENV170031404
CDYI01053319
27524
Bacteroidota
GGA
Ser
>WENV170031245
CDYI01046852
187400
Bacteroidota
GTT
Asn
>WENV170031244
CDYI01046852
187400
Bacteroidota
GTT
Asn
>WENV170031243
CDYI01046852
187400
Bacteroidota
GTT
Asn
>WENV170030435
CDYI01013477
187400
Bacteroidota
GTT
Asn
>WENV170030434
CDYI01013477
187400
Bacteroidota
GTT
Asn
>WENV170030186
CDYI01002514
175844
Bacteroidota
GGC
Ala
>WENV170031517
CDYI01058933
73011
Bacteroidota
CAA
Leu
>WENV170031158
CDYI01043461
73011
Bacteroidota
CAA
Leu
>WENV170031157
CDYI01043458
73011
Bacteroidota
CAA
Leu
>WENV170031366
CDYI01051945
280515
Bacteroidota
CCA
Trp
>WENV170031518
CDYI01058963
183889
Bacteroidota
GGC
Ala
>WENV170030854
CDYI01030452
186142
Bacteroidota
GAT
Ile
>WENV170030450
CDYI01014401
398828
Bacteroidota
CCG
Arg
>WENV170030929
CDYI01033623
74084
Bacteroidota
CAG
Leu
>WENV170030856
CDYI01030467
74084
Bacteroidota
CAG
Leu
>WENV170030691
CDYI01024240
159415
Bacteroidota
TAC
Val
>WENV170030690
CDYI01024240
159415
Bacteroidota
TAC
Val
>WENV170030689
CDYI01024240
159415
Bacteroidota
TAC
Val
>WENV170030383
CDYI01011624
159415
Bacteroidota
TAC
Val
>WENV170030332
CDYI01008793
159415
Bacteroidota
TAC
Val
>WENV170030217
CDYI01004193
480325
Bacteroidota
CTG
Gln
>WENV170030159
CDYI01001613
140771
Bacteroidota
>WENV170031548
CDYI01059909
176192
Bacteroidota
TCT
Arg
>WENV170031285
CDYI01049082
176192
Bacteroidota
TCT
Arg
>WENV170030455
CDYI01014851
176192
Bacteroidota
TCT
Arg
>WENV170030130
CDYI01000030
176192
Bacteroidota
TCT
Arg
>WENV170030591
CDYI01020631
400088
Bacteroidota
GGT
Thr
>WENV170031064
CDYI01038729
69204
Bacteroidota
TGA
Ser
>WENV170030593
CDYI01020692
69204
Bacteroidota
TGA
Ser
>WENV170030388
CDYI01012074
69204
Bacteroidota
TGA
Ser
>WENV170031451
CDYI01055468
280446
Bacteroidota
TTT
Lys
>WENV170031375
CDYI01052388
280446
Bacteroidota
TTT
Lys
>WENV170031372
CDYI01052367
280446
Bacteroidota
TTT
Lys
>WENV170030442
CDYI01013929
280446
Bacteroidota
TTT
Lys
>WENV170030347
CDYI01009214
280446
Bacteroidota
TTT
Lys
>WENV170030609
CDYI01020709
484496
Bacteroidota
TTG
Gln
>WENV170031278
CDYI01048480
484496
Bacteroidota
TTG
Gln
>WENV170031349
CDYI01051388
484496
Bacteroidota
TTG
Gln
>WENV170031208
CDYI01045908
27502
Bacteroidota
GGA
Ser
>WENV170030556
CDYI01018547
27502
Bacteroidota
GGA
Ser
>WENV170031036
CDYI01037792
285750
Bacteroidota
CCC
Gly
>WENV170030328
CDYI01008713
285750
Bacteroidota
CCC
Gly
>WENV170030855
CDYI01030452
186143
Bacteroidota
TGC
Ala
>WENV170031037
CDYI01037796
365112
Bacteroidota
TTT
Lys
>WENV170030665
CDYI01023390
365112
Bacteroidota
TTT
Lys
>WENV170030664
CDYI01023341
365112
Bacteroidota
TTT
Lys
>WENV170030543
CDYI01017731
365112
Bacteroidota
TTT
Lys
>WENV170030310
CDYI01007780
365112
Bacteroidota
TTT
Lys
>WENV170031503
CDYI01058520
398836
Bacteroidota
GCA
Cys
>WENV170031182
CDYI01044745
398836
Bacteroidota
GCA
Cys
>WENV170031144
CDYI01042976
398836
Bacteroidota
GCA
Cys
>WENV170031040
CDYI01037820
398836
Bacteroidota
GCA
Cys
>WENV170030791
CDYI01029049
398836
Bacteroidota
GCA
Cys
>WENV170030766
CDYI01027724
398836
Bacteroidota
GCA
Cys
>WENV170031309
CDYI01050015
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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