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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170031771
CDYJ01014020
405363
Bacillota
GCA
Cys
>WENV170032018
CDYJ01031228
175842
Bacillota
CAC
Val
>WENV170031626
CDYJ01004984
287289
Bacillota
GCC
Gly
>WENV170031993
CDYJ01029079
287289
Bacillota
GCC
Gly
>WENV170031740
CDYJ01011606
215243
Bacillota
CAT
Met
>WENV170031894
CDYJ01022405
190476
Bacillota
CAT
Met
>WENV170031584
CDYJ01002749
280447
Bacillota
GAC
Val
>WENV170031871
CDYJ01020654
5692
Bacillota
GCT
Ser
>WENV170032298
CDYJ01050606
73009
Bacillota
CAG
Leu
>WENV170032065
CDYJ01034334
73009
Bacillota
CAG
Leu
>WENV170031861
CDYJ01020129
73009
Bacillota
CAG
Leu
>WENV170032135
CDYJ01039153
407726
Bacillota
CTG
Gln
>WENV170032131
CDYJ01037989
407726
Bacillota
CTG
Gln
>WENV170031846
CDYJ01019422
175859
Bacillota
TCT
Arg
>WENV170031570
CDYJ01001591
398835
Bacillota
GCC
Gly
>WENV170031728
CDYJ01010769
398835
Bacillota
GCC
Gly
>WENV170031587
CDYJ01003183
295350
Bacillota
TGC
Ala
>WENV170032190
CDYJ01042606
480322
Bacillota
CTG
Gln
>WENV170032054
CDYJ01032976
480322
Bacillota
CTG
Gln
>WENV170031955
CDYJ01026808
175868
Bacillota
GTT
Asn
>WENV170031987
CDYJ01028614
398854
Bacillota
CTC
Glu
>WENV170031957
CDYJ01026958
480324
Bacillota
TTG
Gln
>WENV170031790
CDYJ01016058
175911
Bacillota
GTC
Asp
>WENV170031652
CDYJ01006235
175911
Bacillota
GTC
Asp
>WENV170031624
CDYJ01004984
175911
Bacillota
GTC
Asp
>WENV170031784
CDYJ01016058
292374
Bacillota
TGC
Ala
>WENV170031640
CDYJ01005831
179755
Bacillota
CCG
Arg
>WENV170031895
CDYJ01022405
398832
Bacillota
TTC
Glu
>WENV170032096
CDYJ01035962
294275
Bacillota
TGC
Ala
>WENV170032227
CDYJ01045252
280476
Bacillota
TTT
Lys
>WENV170031783
CDYJ01016058
201856
Bacillota
GAT
Ile
>WENV170031614
CDYJ01004164
321248
Bacillota
TAC
Val
>WENV170032242
CDYJ01046559
321248
Bacillota
TAC
Val
>WENV170032279
CDYJ01049002
398833
Bacillota
TGT
Thr
>WENV170031984
CDYJ01028425
280486
Bacillota
TGC
Ala
>WENV170031676
CDYJ01007698
56074
Bacillota
TGA
Ser
>WENV170031870
CDYJ01020654
56074
Bacillota
TGA
Ser
>WENV170031885
CDYJ01022109
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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