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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
89 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170033379
CDYK01024089
234991
Bacillota
GAT
Ile
>WENV170032451
CDYK01003604
280500
Bacillota
TGC
Ala
>WENV170032722
CDYK01011016
280500
Bacillota
TGC
Ala
>WENV170032837
CDYK01013169
280500
Bacillota
TGC
Ala
>WENV170033578
CDYK01028502
349107
Bacillota
GCC
Gly
>WENV170033868
CDYK01035178
349107
Bacillota
GCC
Gly
>WENV170033942
CDYK01036965
349107
Bacillota
GCC
Gly
>WENV170033971
CDYK01037354
349107
Bacillota
GCC
Gly
>WENV170032589
CDYK01007173
280428
Bacillota
GAA
Phe
>WENV170033217
CDYK01021199
280428
Bacillota
GAA
Phe
>WENV170032868
CDYK01014127
229015
Bacillota
GTG
His
>WENV170032464
CDYK01003633
179917
Bacillota
CAT
Met
>WENV170033634
CDYK01029994
179917
Bacillota
CAT
Met
>WENV170033829
CDYK01033747
179917
Bacillota
CAT
Met
>WENV170033869
CDYK01035178
280466
Bacillota
TAC
Val
>WENV170033579
CDYK01028502
280466
Bacillota
TAC
Val
>WENV170032934
CDYK01014999
280492
Bacillota
CTT
Lys
>WENV170033711
CDYK01031868
280492
Bacillota
CTT
Lys
>WENV170033835
CDYK01033984
175842
Bacillota
CAC
Val
>WENV170033486
CDYK01026303
175842
Bacillota
CAC
Val
>WENV170032607
CDYK01007881
175842
Bacillota
CAC
Val
>WENV170032742
CDYK01011336
215243
Bacillota
CAT
Met
>WENV170032441
CDYK01003174
190476
Bacillota
CAT
Met
>WENV170033348
CDYK01023479
190476
Bacillota
CAT
Met
>WENV170034357
CDYK01046021
280447
Bacillota
GAC
Val
>WENV170033900
CDYK01035906
280447
Bacillota
GAC
Val
>WENV170033851
CDYK01034387
280447
Bacillota
GAC
Val
>WENV170033078
CDYK01018443
280447
Bacillota
GAC
Val
>WENV170033533
CDYK01027083
5692
Bacillota
GCT
Ser
>WENV170032514
CDYK01005270
5692
Bacillota
GCT
Ser
>WENV170033344
CDYK01023439
175825
Bacillota
GAT
Ile
>WENV170033215
CDYK01021199
280427
Bacillota
TAC
Val
>WENV170032583
CDYK01006848
284723
Bacillota
TAC
Val
>WENV170032461
CDYK01003633
284723
Bacillota
TAC
Val
>WENV170033470
CDYK01025982
73009
Bacillota
CAG
Leu
>WENV170032522
CDYK01005496
73009
Bacillota
CAG
Leu
>WENV170032780
CDYK01012097
291581
Bacillota
CGG
Pro
>WENV170032336
CDYK01000686
291581
Bacillota
CGG
Pro
>WENV170033094
CDYK01018734
291581
Bacillota
CGG
Pro
>WENV170033707
CDYK01031614
175859
Bacillota
TCT
Arg
>WENV170032452
CDYK01003606
175859
Bacillota
TCT
Arg
>WENV170032538
CDYK01005973
175831
Bacillota
ACG
Arg
>WENV170032867
CDYK01014127
179810
Bacillota
TCT
Arg
>WENV170033385
CDYK01024182
291634
Bacillota
GAA
Phe
>WENV170032472
CDYK01003650
291634
Bacillota
GAA
Phe
>WENV170032836
CDYK01013169
175916
Bacillota
GAT
Ile
>WENV170033706
CDYK01031581
27216
Bacillota
GCT
Ser
>WENV170033296
CDYK01022373
480322
Bacillota
CTG
Gln
>WENV170033093
CDYK01018734
480322
Bacillota
CTG
Gln
>WENV170033065
CDYK01018037
480322
Bacillota
CTG
Gln
>WENV170032777
CDYK01012086
480322
Bacillota
CTG
Gln
>WENV170032502
CDYK01004882
480322
Bacillota
CTG
Gln
>WENV170032335
CDYK01000686
480322
Bacillota
CTG
Gln
>WENV170034231
CDYK01042554
175868
Bacillota
GTT
Asn
>WENV170033002
CDYK01017010
175868
Bacillota
GTT
Asn
>WENV170032720
CDYK01010967
175868
Bacillota
GTT
Asn
>WENV170033001
CDYK01017010
398854
Bacillota
CTC
Glu
>WENV170033345
CDYK01023450
291576
Bacillota
CCC
Gly
>WENV170033058
CDYK01017728
291576
Bacillota
CCC
Gly
>WENV170033943
CDYK01037007
480324
Bacillota
TTG
Gln
>WENV170032973
CDYK01016314
480324
Bacillota
TTG
Gln
>WENV170032439
CDYK01003021
480324
Bacillota
TTG
Gln
>WENV170033599
CDYK01028928
497729
Bacillota
CCA
Trp
>WENV170032485
CDYK01004097
303718
Bacillota
TGT
Thr
>WENV170033254
CDYK01021626
56079
Bacillota
AAG
Leu
>WENV170032334
CDYK01000671
323864
Bacillota
TGC
Ala
>WENV170032528
CDYK01005662
117745
Bacillota
GTA
Tyr
>WENV170033116
CDYK01019467
280444
Bacillota
GGT
Thr
>WENV170033115
CDYK01019467
280444
Bacillota
GGT
Thr
>WENV170032989
CDYK01016399
321753
Bacillota
GCC
Gly
>WENV170033817
CDYK01033666
179755
Bacillota
CCG
Arg
>WENV170032818
CDYK01012872
179755
Bacillota
CCG
Arg
>WENV170034250
CDYK01043378
179755
Bacillota
CCG
Arg
>WENV170033487
CDYK01026334
398832
Bacillota
TTC
Glu
>WENV170032816
CDYK01012843
398832
Bacillota
TTC
Glu
>WENV170034169
CDYK01041357
280462
Bacillota
GAA
Phe
>WENV170032440
CDYK01003030
398852
Bacillota
CTC
Glu
>WENV170033294
CDYK01022294
398852
Bacillota
CTC
Glu
>WENV170033659
CDYK01030761
398852
Bacillota
CTC
Glu
>WENV170034052
CDYK01039195
398852
Bacillota
CTC
Glu
>WENV170033397
CDYK01024182
184539
Bacillota
TCT
Arg
>WENV170032933
CDYK01014983
175857
Bacillota
GTG
His
>WENV170034162
CDYK01041109
398833
Bacillota
TGT
Thr
>WENV170033532
CDYK01027083
56074
Bacillota
TGA
Ser
>WENV170032874
CDYK01014173
56074
Bacillota
TGA
Ser
>WENV170032658
CDYK01009351
56074
Bacillota
TGA
Ser
>WENV170032513
CDYK01005270
56074
Bacillota
TGA
Ser
>WENV170034042
CDYK01039188
482078
Bacillota
CCC
Gly
>WENV170033608
CDYK01028999
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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