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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
71 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170036757
CDYP01002407
117741
Bacteroidota
TAG
Leu
>WENV170037027
CDYP01017409
398829
Bacteroidota
CCT
Arg
>WENV170037054
CDYP01018889
398829
Bacteroidota
CCT
Arg
>WENV170037082
CDYP01020236
175838
Bacteroidota
GTT
Asn
>WENV170037083
CDYP01020236
175838
Bacteroidota
GTT
Asn
>WENV170037084
CDYP01020236
175838
Bacteroidota
GTT
Asn
>WENV170037085
CDYP01020236
175838
Bacteroidota
GTT
Asn
>WENV170037086
CDYP01020236
175838
Bacteroidota
GTT
Asn
>WENV170037159
CDYP01024031
175904
Bacteroidota
CGG
Pro
>WENV170037024
CDYP01017242
289031
Bacteroidota
CAT
Met
>WENV170037016
CDYP01017031
280557
Bacteroidota
CAT
Met
>WENV170036896
CDYP01010583
20492
Bacteroidota
GGA
Ser
>WENV170036779
CDYP01003762
20206
Bacteroidota
GGA
Ser
>WENV170037136
CDYP01022507
483416
Bacteroidota
CTG
Gln
>WENV170036889
CDYP01010186
398871
Bacteroidota
TTC
Glu
>WENV170037155
CDYP01023646
56493
Bacteroidota
TGA
Ser
>WENV170036766
CDYP01002830
175906
Bacteroidota
GTG
His
>WENV170037156
CDYP01023646
175903
Bacteroidota
GTG
His
>WENV170037034
CDYP01017568
175903
Bacteroidota
GTG
His
>WENV170036925
CDYP01011958
175903
Bacteroidota
GTG
His
>WENV170036936
CDYP01012130
156068
Bacteroidota
TAC
Val
>WENV170036935
CDYP01012130
156068
Bacteroidota
TAC
Val
>WENV170036934
CDYP01012130
156068
Bacteroidota
TAC
Val
>WENV170036933
CDYP01012130
156068
Bacteroidota
TAC
Val
>WENV170037171
CDYP01024608
118089
Bacteroidota
TAG
Leu
>WENV170037068
CDYP01019235
175908
Bacteroidota
GTC
Asp
>WENV170037067
CDYP01019235
175908
Bacteroidota
GTC
Asp
>WENV170037066
CDYP01019235
175908
Bacteroidota
GTC
Asp
>WENV170037065
CDYP01019235
175908
Bacteroidota
GTC
Asp
>WENV170036990
CDYP01015419
178907
Bacteroidota
TCT
Arg
>WENV170036980
CDYP01014746
405877
Bacteroidota
GGT
Thr
>WENV170036986
CDYP01015084
29791
Bacteroidota
GCT
Ser
>WENV170036793
CDYP01005195
20449
Bacteroidota
GGA
Ser
>WENV170036724
CDYP01000240
20449
Bacteroidota
GGA
Ser
>WENV170036772
CDYP01003552
178133
Bacteroidota
GAT
Ile
>WENV170036727
CDYP01000655
178133
Bacteroidota
GAT
Ile
>WENV170036930
CDYP01012112
21127
Bacteroidota
GGA
Ser
>WENV170036828
CDYP01006965
56072
Bacteroidota
TAA
Leu
>WENV170036732
CDYP01000871
57807
Bacteroidota
TGA
Ser
>WENV170036785
CDYP01004386
57807
Bacteroidota
TGA
Ser
>WENV170036887
CDYP01010035
57807
Bacteroidota
TGA
Ser
>WENV170037151
CDYP01023482
57807
Bacteroidota
TGA
Ser
>WENV170037162
CDYP01024059
57807
Bacteroidota
TGA
Ser
>WENV170036981
CDYP01014857
175902
Bacteroidota
GGC
Ala
>WENV170036987
CDYP01015084
398860
Bacteroidota
CTC
Glu
>WENV170037013
CDYP01016844
280451
Bacteroidota
CGT
Thr
>WENV170037041
CDYP01018401
99847
Bacteroidota
GTA
Tyr
>WENV170037001
CDYP01015930
99847
Bacteroidota
GTA
Tyr
>WENV170036768
CDYP01002994
99847
Bacteroidota
GTA
Tyr
>WENV170037018
CDYP01017052
399200
Bacteroidota
CAT
Met
>WENV170037126
CDYP01021914
186874
Bacteroidota
CAT
Met
>WENV170036944
CDYP01012750
186874
Bacteroidota
CAT
Met
>WENV170036826
CDYP01006796
187400
Bacteroidota
GTT
Asn
>WENV170036825
CDYP01006796
187400
Bacteroidota
GTT
Asn
>WENV170036824
CDYP01006796
187400
Bacteroidota
GTT
Asn
>WENV170037053
CDYP01018888
175844
Bacteroidota
GGC
Ala
>WENV170036985
CDYP01015078
158068
Bacteroidota
GGG
Pro
>WENV170036780
CDYP01003973
158068
Bacteroidota
GGG
Pro
>WENV170036952
CDYP01013583
398828
Bacteroidota
CCG
Arg
>WENV170037062
CDYP01018933
74084
Bacteroidota
CAG
Leu
>WENV170036904
CDYP01010808
480325
Bacteroidota
CTG
Gln
>WENV170036856
CDYP01008335
140771
Bacteroidota
>WENV170037164
CDYP01024060
140771
Bacteroidota
>WENV170036883
CDYP01010011
176192
Bacteroidota
TCT
Arg
>WENV170037081
CDYP01020063
400088
Bacteroidota
GGT
Thr
>WENV170036886
CDYP01010012
280446
Bacteroidota
TTT
Lys
>WENV170036739
CDYP01001239
280446
Bacteroidota
TTT
Lys
>WENV170036890
CDYP01010211
484496
Bacteroidota
TTG
Gln
>WENV170036740
CDYP01001446
484496
Bacteroidota
TTG
Gln
>WENV170036959
CDYP01013809
398836
Bacteroidota
GCA
Cys
>WENV170036967
CDYP01014316
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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