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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
92 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170038403
CDYR01006392
343590
Bacillota
GCC
Gly
>WENV170039066
CDYR01031411
343590
Bacillota
GCC
Gly
>WENV170039424
CDYR01043387
343590
Bacillota
GCC
Gly
>WENV170039459
CDYR01044250
343590
Bacillota
GCC
Gly
>WENV170039460
CDYR01044250
343590
Bacillota
GCC
Gly
>WENV170038598
CDYR01014740
234991
Bacillota
GAT
Ile
>WENV170038924
CDYR01026408
404076
Bacillota
GCC
Gly
>WENV170038990
CDYR01028664
404076
Bacillota
GCC
Gly
>WENV170039454
CDYR01043904
404076
Bacillota
GCC
Gly
>WENV170038318
CDYR01002406
349107
Bacillota
GCC
Gly
>WENV170038613
CDYR01015261
349107
Bacillota
GCC
Gly
>WENV170038988
CDYR01028664
184504
Bacillota
GTC
Asp
>WENV170039453
CDYR01043904
184504
Bacillota
GTC
Asp
>WENV170038317
CDYR01002406
280428
Bacillota
GAA
Phe
>WENV170039295
CDYR01038199
280492
Bacillota
CTT
Lys
>WENV170039242
CDYR01036123
280492
Bacillota
CTT
Lys
>WENV170038908
CDYR01025664
175842
Bacillota
CAC
Val
>WENV170038396
CDYR01005640
291629
Bacillota
CCA
Trp
>WENV170038603
CDYR01014780
236579
Bacillota
GAT
Ile
>WENV170038602
CDYR01014780
295166
Bacillota
TGC
Ala
>WENV170039682
CDYR01052595
404079
Bacillota
CAT
Met
>WENV170039497
CDYR01045150
190476
Bacillota
CAT
Met
>WENV170039188
CDYR01035358
190476
Bacillota
CAT
Met
>WENV170039436
CDYR01043476
82124
Bacillota
TAA
Leu
>WENV170038416
CDYR01006813
82124
Bacillota
TAA
Leu
>WENV170038678
CDYR01017785
82124
Bacillota
TAA
Leu
>WENV170038325
CDYR01002500
73664
Bacillota
CAG
Leu
>WENV170038726
CDYR01019117
73664
Bacillota
CAG
Leu
>WENV170039387
CDYR01041651
280447
Bacillota
GAC
Val
>WENV170038797
CDYR01020654
186123
Bacillota
GTC
Asp
>WENV170038394
CDYR01005640
186123
Bacillota
GTC
Asp
>WENV170038392
CDYR01005640
186123
Bacillota
GTC
Asp
>WENV170039282
CDYR01037241
284723
Bacillota
TAC
Val
>WENV170039575
CDYR01048432
175859
Bacillota
TCT
Arg
>WENV170039149
CDYR01033936
175859
Bacillota
TCT
Arg
>WENV170038676
CDYR01017785
175847
Bacillota
GTC
Asp
>WENV170039137
CDYR01033753
332181
Bacillota
TGT
Thr
>WENV170039440
CDYR01043476
179810
Bacillota
TCT
Arg
>WENV170039253
CDYR01036320
284627
Bacillota
GAA
Phe
>WENV170039069
CDYR01031696
284627
Bacillota
GAA
Phe
>WENV170038925
CDYR01026410
284627
Bacillota
GAA
Phe
>WENV170038391
CDYR01005591
284627
Bacillota
GAA
Phe
>WENV170038798
CDYR01020654
291634
Bacillota
GAA
Phe
>WENV170038393
CDYR01005640
291634
Bacillota
GAA
Phe
>WENV170039572
CDYR01048038
183957
Bacillota
CCT
Arg
>WENV170039677
CDYR01052590
346451
Bacillota
TTT
Lys
>WENV170039281
CDYR01036972
346451
Bacillota
TTT
Lys
>WENV170038889
CDYR01025184
346451
Bacillota
TTT
Lys
>WENV170039617
CDYR01050130
295350
Bacillota
TGC
Ala
>WENV170038696
CDYR01018191
187364
Bacillota
CAT
Met
>WENV170039641
CDYR01050992
175868
Bacillota
GTT
Asn
>WENV170038480
CDYR01009568
480324
Bacillota
TTG
Gln
>WENV170038949
CDYR01027255
497729
Bacillota
CCA
Trp
>WENV170039219
CDYR01035724
175899
Bacillota
GTC
Asp
>WENV170039205
CDYR01035399
175899
Bacillota
GTC
Asp
>WENV170039332
CDYR01039269
303718
Bacillota
TGT
Thr
>WENV170038619
CDYR01015269
303718
Bacillota
TGT
Thr
>WENV170038324
CDYR01002500
56079
Bacillota
AAG
Leu
>WENV170038299
CDYR01001595
56079
Bacillota
AAG
Leu
>WENV170038945
CDYR01027232
186051
Bacillota
GAT
Ile
>WENV170039208
CDYR01035399
117745
Bacillota
GTA
Tyr
>WENV170038622
CDYR01015271
117745
Bacillota
GTA
Tyr
>WENV170038794
CDYR01020602
483485
Bacillota
CCC
Gly
>WENV170039014
CDYR01029864
46643
Bacillota
TGA
Ser
>WENV170038728
CDYR01019237
321753
Bacillota
GCC
Gly
>WENV170038664
CDYR01016903
179755
Bacillota
CCG
Arg
>WENV170038599
CDYR01014740
291650
Bacillota
TGC
Ala
>WENV170039189
CDYR01035358
398832
Bacillota
TTC
Glu
>WENV170039029
CDYR01030206
398832
Bacillota
TTC
Glu
>WENV170038825
CDYR01021822
118669
Bacillota
GTA
Tyr
>WENV170038415
CDYR01006813
118669
Bacillota
GTA
Tyr
>WENV170039210
CDYR01035399
280462
Bacillota
GAA
Phe
>WENV170039015
CDYR01029864
280462
Bacillota
GAA
Phe
>WENV170039571
CDYR01048037
398852
Bacillota
CTC
Glu
>WENV170039296
CDYR01038199
398852
Bacillota
CTC
Glu
>WENV170038918
CDYR01026033
398852
Bacillota
CTC
Glu
>WENV170039140
CDYR01033753
289123
Bacillota
GGT
Thr
>WENV170039382
CDYR01041246
406186
Bacillota
CTC
Glu
>WENV170039381
CDYR01041246
406186
Bacillota
CTC
Glu
>WENV170039380
CDYR01041246
406186
Bacillota
CTC
Glu
>WENV170038853
CDYR01023159
406186
Bacillota
CTC
Glu
>WENV170038852
CDYR01023159
406186
Bacillota
CTC
Glu
>WENV170039226
CDYR01035724
175857
Bacillota
GTG
His
>WENV170039441
CDYR01043476
175857
Bacillota
GTG
His
>WENV170039228
CDYR01035724
280463
Bacillota
TTT
Lys
>WENV170039211
CDYR01035399
280463
Bacillota
TTT
Lys
>WENV170039595
CDYR01048965
280486
Bacillota
TGC
Ala
>WENV170038806
CDYR01021036
405393
Bacillota
GCC
Gly
>WENV170038395
CDYR01005640
405393
Bacillota
GCC
Gly
>WENV170038283
CDYR01000162
405393
Bacillota
GCC
Gly
>WENV170038560
CDYR01012852
56074
Bacillota
TGA
Ser
>WENV170039265
CDYR01036869
482078
Bacillota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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