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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
84 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170040622
CDYS01039247
295385
Bacteroidota
CCA
Trp
>WENV170040811
CDYS01048217
295385
Bacteroidota
CCA
Trp
>WENV170039758
CDYS01002681
117741
Bacteroidota
TAG
Leu
>WENV170039838
CDYS01006100
398829
Bacteroidota
CCT
Arg
>WENV170040812
CDYS01048217
175838
Bacteroidota
GTT
Asn
>WENV170040813
CDYS01048217
175838
Bacteroidota
GTT
Asn
>WENV170040593
CDYS01037811
404226
Bacteroidota
CCT
Arg
>WENV170040511
CDYS01034675
289031
Bacteroidota
CAT
Met
>WENV170039889
CDYS01008517
280557
Bacteroidota
CAT
Met
>WENV170040493
CDYS01033843
280557
Bacteroidota
CAT
Met
>WENV170040896
CDYS01051687
20206
Bacteroidota
GGA
Ser
>WENV170040248
CDYS01024321
483416
Bacteroidota
CTG
Gln
>WENV170039810
CDYS01004589
483416
Bacteroidota
CTG
Gln
>WENV170040685
CDYS01042089
398871
Bacteroidota
TTC
Glu
>WENV170040684
CDYS01042089
398871
Bacteroidota
TTC
Glu
>WENV170040172
CDYS01021590
201819
Bacteroidota
CAT
Met
>WENV170040173
CDYS01021590
201819
Bacteroidota
CAT
Met
>WENV170040268
CDYS01024812
201819
Bacteroidota
CAT
Met
>WENV170040269
CDYS01024812
201819
Bacteroidota
CAT
Met
>WENV170040840
CDYS01049435
56493
Bacteroidota
TGA
Ser
>WENV170040301
CDYS01026196
175906
Bacteroidota
GTG
His
>WENV170039827
CDYS01005316
175903
Bacteroidota
GTG
His
>WENV170040550
CDYS01035638
118089
Bacteroidota
TAG
Leu
>WENV170039832
CDYS01005933
280530
Bacteroidota
CCA
Trp
>WENV170041042
CDYS01058321
182267
Bacteroidota
GTT
Asn
>WENV170041041
CDYS01058321
182267
Bacteroidota
GTT
Asn
>WENV170041040
CDYS01058321
182267
Bacteroidota
GTT
Asn
>WENV170039846
CDYS01006135
182267
Bacteroidota
GTT
Asn
>WENV170039845
CDYS01006135
182267
Bacteroidota
GTT
Asn
>WENV170039844
CDYS01006135
182267
Bacteroidota
GTT
Asn
>WENV170039716
CDYS01000489
20449
Bacteroidota
GGA
Ser
>WENV170040219
CDYS01023464
56072
Bacteroidota
TAA
Leu
>WENV170041049
CDYS01059314
57807
Bacteroidota
TGA
Ser
>WENV170041032
CDYS01057972
57807
Bacteroidota
TGA
Ser
>WENV170041030
CDYS01057816
57807
Bacteroidota
TGA
Ser
>WENV170041024
CDYS01057345
57807
Bacteroidota
TGA
Ser
>WENV170040222
CDYS01023775
57807
Bacteroidota
TGA
Ser
>WENV170040647
CDYS01040551
175886
Bacteroidota
GGC
Ala
>WENV170040638
CDYS01039736
175902
Bacteroidota
GGC
Ala
>WENV170040171
CDYS01021114
175902
Bacteroidota
GGC
Ala
>WENV170040911
CDYS01052683
179697
Bacteroidota
TGT
Thr
>WENV170040331
CDYS01027728
280451
Bacteroidota
CGT
Thr
>WENV170040448
CDYS01032380
418894
Bacteroidota
TTC
Glu
>WENV170040447
CDYS01032380
418894
Bacteroidota
TTC
Glu
>WENV170039909
CDYS01009468
418894
Bacteroidota
TTC
Glu
>WENV170040809
CDYS01048217
99847
Bacteroidota
GTA
Tyr
>WENV170039956
CDYS01011384
399200
Bacteroidota
CAT
Met
>WENV170040736
CDYS01044434
399200
Bacteroidota
CAT
Met
>WENV170040867
CDYS01050872
186874
Bacteroidota
CAT
Met
>WENV170040465
CDYS01032817
186874
Bacteroidota
CAT
Met
>WENV170040411
CDYS01030678
186874
Bacteroidota
CAT
Met
>WENV170039853
CDYS01006588
189252
Bacteroidota
GGC
Ala
>WENV170040730
CDYS01044387
178179
Bacteroidota
GGC
Ala
>WENV170040091
CDYS01017950
488746
Bacteroidota
CTG
Gln
>WENV170040963
CDYS01054423
280478
Bacteroidota
GCC
Gly
>WENV170039719
CDYS01000684
175844
Bacteroidota
GGC
Ala
>WENV170040273
CDYS01025203
73011
Bacteroidota
CAA
Leu
>WENV170041004
CDYS01056850
280515
Bacteroidota
CCA
Trp
>WENV170040820
CDYS01048609
183889
Bacteroidota
GGC
Ala
>WENV170040260
CDYS01024785
183889
Bacteroidota
GGC
Ala
>WENV170040019
CDYS01013922
183889
Bacteroidota
GGC
Ala
>WENV170040092
CDYS01017950
158068
Bacteroidota
GGG
Pro
>WENV170040063
CDYS01016503
158068
Bacteroidota
GGG
Pro
>WENV170039965
CDYS01011878
158068
Bacteroidota
GGG
Pro
>WENV170040922
CDYS01053127
398828
Bacteroidota
CCG
Arg
>WENV170040097
CDYS01018404
74084
Bacteroidota
CAG
Leu
>WENV170040121
CDYS01019247
159415
Bacteroidota
TAC
Val
>WENV170040122
CDYS01019247
159415
Bacteroidota
TAC
Val
>WENV170040123
CDYS01019247
159415
Bacteroidota
TAC
Val
>WENV170040500
CDYS01034190
480325
Bacteroidota
CTG
Gln
>WENV170041046
CDYS01058840
280446
Bacteroidota
TTT
Lys
>WENV170040825
CDYS01049073
280446
Bacteroidota
TTT
Lys
>WENV170039966
CDYS01011878
280446
Bacteroidota
TTT
Lys
>WENV170039906
CDYS01009382
280446
Bacteroidota
TTT
Lys
>WENV170040852
CDYS01050440
484496
Bacteroidota
TTG
Gln
>WENV170040341
CDYS01028377
484496
Bacteroidota
TTG
Gln
>WENV170040270
CDYS01024838
484496
Bacteroidota
TTG
Gln
>WENV170040068
CDYS01016587
285750
Bacteroidota
CCC
Gly
>WENV170039767
CDYS01003204
398836
Bacteroidota
GCA
Cys
>WENV170040042
CDYS01015190
398836
Bacteroidota
GCA
Cys
>WENV170040160
CDYS01020775
398836
Bacteroidota
GCA
Cys
>WENV170040440
CDYS01032114
398836
Bacteroidota
GCA
Cys
>WENV170040754
CDYS01045696
398836
Bacteroidota
GCA
Cys
>WENV170040918
CDYS01053011
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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