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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170040767
CDYS01046326
204388
Verrucomicrobiota
CAT
Met
>WENV170040360
CDYS01029631
406043
Verrucomicrobiota
GCA
Cys
>WENV170040660
CDYS01041543
293125
Verrucomicrobiota
GAA
Phe
>WENV170040302
CDYS01026228
406350
Verrucomicrobiota
TGT
Thr
>WENV170040728
CDYS01044378
148006
Verrucomicrobiota
CAA
Leu
>WENV170040089
CDYS01017916
293105
Verrucomicrobiota
CAT
Met
>WENV170040607
CDYS01038709
405901
Verrucomicrobiota
GCC
Gly
>WENV170040355
CDYS01029186
405901
Verrucomicrobiota
GCC
Gly
>WENV170040658
CDYS01041543
483642
Verrucomicrobiota
CCC
Gly
>WENV170040940
CDYS01053531
157427
Verrucomicrobiota
GTC
Asp
>WENV170039799
CDYS01004136
157427
Verrucomicrobiota
GTC
Asp
>WENV170040303
CDYS01026228
293079
Verrucomicrobiota
CGC
Ala
>WENV170040729
CDYS01044378
120352
Verrucomicrobiota
TAG
Leu
>WENV170040659
CDYS01041543
489412
Verrucomicrobiota
TCC
Gly
>WENV170039803
CDYS01004149
293069
Verrucomicrobiota
CTT
Lys
>WENV170039802
CDYS01004149
293069
Verrucomicrobiota
CTT
Lys
>WENV170040727
CDYS01044378
406336
Verrucomicrobiota
CCT
Arg
>WENV170040960
CDYS01054406
406369
Verrucomicrobiota
CCG
Arg
>WENV170040769
CDYS01046717
405940
Verrucomicrobiota
GGT
Thr
>WENV170040599
CDYS01038250
406044
Verrucomicrobiota
CTG
Gln
>WENV170040657
CDYS01041543
187556
Verrucomicrobiota
GGG
Pro
>WENV170040088
CDYS01017916
406037
Verrucomicrobiota
GTG
His
>WENV170040771
CDYS01046718
406360
Verrucomicrobiota
GAC
Val
>WENV170040783
CDYS01047208
187548
Verrucomicrobiota
TCT
Arg
>WENV170039801
CDYS01004149
406040
Verrucomicrobiota
CGT
Thr
>WENV170040025
CDYS01014206
57652
Verrucomicrobiota
TGA
Ser
>WENV170039866
CDYS01007528
406039
Verrucomicrobiota
CAC
Val
>WENV170040048
CDYS01015626
406368
Verrucomicrobiota
TTG
Gln
>WENV170040015
CDYS01013734
101461
Verrucomicrobiota
GTA
Tyr
>WENV170040747
CDYS01045343
293095
Verrucomicrobiota
TTT
Lys
>WENV170039800
CDYS01004149
187561
Verrucomicrobiota
CGG
Pro
>WENV170040354
CDYS01029186
406342
Verrucomicrobiota
CAT
Met
>WENV170040014
CDYS01013734
406351
Verrucomicrobiota
GTT
Asn
>WENV170040047
CDYS01015626
303305
Verrucomicrobiota
GGC
Ala
>WENV170040544
CDYS01035604
8938
Verrucomicrobiota
GCT
Ser
>WENV170040661
CDYS01041543
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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