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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170041797
CDYT01023719
175883
Actinomycetota
GAT
Ile
>WENV170042091
CDYT01034772
175907
Actinomycetota
TAC
Val
>WENV170041694
CDYT01020141
56083
Actinomycetota
CGA
Ser
>WENV170041193
CDYT01004576
176075
Actinomycetota
TCT
Arg
>WENV170041614
CDYT01017410
175848
Actinomycetota
TGG
Pro
>WENV170041432
CDYT01011310
59689
Actinomycetota
GGA
Ser
>WENV170042018
CDYT01031950
29393
Actinomycetota
GCT
Ser
>WENV170042151
CDYT01036692
349164
Actinomycetota
CTC
Glu
>WENV170042140
CDYT01036580
280524
Actinomycetota
TGC
Ala
>WENV170041513
CDYT01013391
175949
Actinomycetota
CAT
Met
>WENV170041805
CDYT01024375
191955
Actinomycetota
TGT
Thr
>WENV170041931
CDYT01028662
280544
Actinomycetota
GTG
His
>WENV170041081
CDYT01000811
280496
Actinomycetota
CGT
Thr
>WENV170041944
CDYT01029293
280703
Actinomycetota
CCT
Arg
>WENV170042082
CDYT01034677
358727
Actinomycetota
CCG
Arg
>WENV170041150
CDYT01002979
483206
Actinomycetota
CTG
Gln
>WENV170041177
CDYT01003866
99865
Actinomycetota
CAG
Leu
>WENV170042152
CDYT01036692
398853
Actinomycetota
CTG
Gln
>WENV170041821
CDYT01024948
175843
Actinomycetota
CAA
Leu
>WENV170042139
CDYT01036580
179238
Actinomycetota
GAT
Ile
>WENV170041143
CDYT01002777
506175
Actinomycetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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