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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170043808
CDYU01049611
179231
Actinomycetota
TAC
Val
>WENV170043291
CDYU01034239
176499
Actinomycetota
CAT
Met
>WENV170042643
CDYU01013839
280498
Actinomycetota
GTT
Asn
>WENV170042649
CDYU01013839
280498
Actinomycetota
GTT
Asn
>WENV170042650
CDYU01013839
280498
Actinomycetota
GTT
Asn
>WENV170042423
CDYU01007079
140768
Actinomycetota
TAG
Leu
>WENV170042562
CDYU01011489
482604
Actinomycetota
TTG
Gln
>WENV170043537
CDYU01040687
175837
Actinomycetota
ACG
Arg
>WENV170043536
CDYU01040687
175837
Actinomycetota
ACG
Arg
>WENV170042964
CDYU01022834
175837
Actinomycetota
ACG
Arg
>WENV170042963
CDYU01022834
175837
Actinomycetota
ACG
Arg
>WENV170043123
CDYU01028446
280549
Actinomycetota
CAC
Val
>WENV170043867
CDYU01051557
280441
Actinomycetota
CCG
Arg
>WENV170042648
CDYU01013839
176638
Actinomycetota
GGG
Pro
>WENV170043854
CDYU01051160
280524
Actinomycetota
TGC
Ala
>WENV170043135
CDYU01029033
280523
Actinomycetota
GGC
Ala
>WENV170043855
CDYU01051160
280523
Actinomycetota
GGC
Ala
>WENV170042431
CDYU01007536
175841
Actinomycetota
TAT
Ile
>WENV170042392
CDYU01006623
175841
Actinomycetota
TAT
Ile
>WENV170043944
CDYU01053175
280496
Actinomycetota
CGT
Thr
>WENV170042393
CDYU01006623
175872
Actinomycetota
GTC
Asp
>WENV170042391
CDYU01006623
175872
Actinomycetota
GTC
Asp
>WENV170043288
CDYU01034239
20205
Actinomycetota
GCT
Ser
>WENV170043774
CDYU01048208
280450
Actinomycetota
TTT
Lys
>WENV170043167
CDYU01029962
480329
Actinomycetota
CCC
Gly
>WENV170043873
CDYU01051831
480329
Actinomycetota
CCC
Gly
>WENV170042762
CDYU01016671
175882
Actinomycetota
TGG
Pro
>WENV170044018
CDYU01055558
20209
Actinomycetota
GAG
Leu
>WENV170043134
CDYU01029033
480319
Actinomycetota
TTG
Gln
>WENV170043236
CDYU01032469
280489
Actinomycetota
CTC
Glu
>WENV170043868
CDYU01051731
280499
Actinomycetota
CCT
Arg
>WENV170042252
CDYU01003030
398853
Actinomycetota
CTG
Gln
>WENV170043237
CDYU01032469
398853
Actinomycetota
CTG
Gln
>WENV170042761
CDYU01016671
175843
Actinomycetota
CAA
Leu
>WENV170042432
CDYU01007536
203883
Actinomycetota
TCT
Arg
>WENV170043287
CDYU01034239
46642
Actinomycetota
CGA
Ser
>WENV170043872
CDYU01051831
104211
Actinomycetota
CAG
Leu
>WENV170043290
CDYU01034239
117903
Actinomycetota
GTA
Tyr
>WENV170043923
CDYU01052813
56071
Actinomycetota
TGA
Ser
>WENV170043292
CDYU01034239
56071
Actinomycetota
TGA
Ser
>WENV170042760
CDYU01016671
147796
Actinomycetota
TAA
Leu
>WENV170042422
CDYU01007079
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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