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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
147 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170042226
CDYU01001929
295385
Bacteroidota
CCA
Trp
>WENV170043052
CDYU01025539
295385
Bacteroidota
CCA
Trp
>WENV170042215
CDYU01001538
285360
Bacteroidota
TTT
Lys
>WENV170043262
CDYU01033380
285360
Bacteroidota
TTT
Lys
>WENV170043794
CDYU01048674
117741
Bacteroidota
TAG
Leu
>WENV170042210
CDYU01001359
398829
Bacteroidota
CCT
Arg
>WENV170042260
CDYU01003376
398829
Bacteroidota
CCT
Arg
>WENV170042821
CDYU01017986
175838
Bacteroidota
GTT
Asn
>WENV170042822
CDYU01017986
175838
Bacteroidota
GTT
Asn
>WENV170043496
CDYU01039841
175838
Bacteroidota
GTT
Asn
>WENV170043497
CDYU01039841
175838
Bacteroidota
GTT
Asn
>WENV170043498
CDYU01039841
175838
Bacteroidota
GTT
Asn
>WENV170043499
CDYU01039841
175838
Bacteroidota
GTT
Asn
>WENV170043309
CDYU01034734
404226
Bacteroidota
CCT
Arg
>WENV170042777
CDYU01017144
404226
Bacteroidota
CCT
Arg
>WENV170043026
CDYU01024882
404226
Bacteroidota
CCT
Arg
>WENV170042763
CDYU01016675
175904
Bacteroidota
CGG
Pro
>WENV170044033
CDYU01056071
289031
Bacteroidota
CAT
Met
>WENV170043405
CDYU01037441
289031
Bacteroidota
CAT
Met
>WENV170043087
CDYU01027146
289031
Bacteroidota
CAT
Met
>WENV170042778
CDYU01017145
289031
Bacteroidota
CAT
Met
>WENV170043082
CDYU01026828
280553
Bacteroidota
TTT
Lys
>WENV170042908
CDYU01021127
280553
Bacteroidota
TTT
Lys
>WENV170043809
CDYU01049614
280557
Bacteroidota
CAT
Met
>WENV170043080
CDYU01026810
280557
Bacteroidota
CAT
Met
>WENV170043104
CDYU01027672
20492
Bacteroidota
GGA
Ser
>WENV170042572
CDYU01012032
20492
Bacteroidota
GGA
Ser
>WENV170043512
CDYU01040159
20206
Bacteroidota
GGA
Ser
>WENV170043519
CDYU01040167
483416
Bacteroidota
CTG
Gln
>WENV170043271
CDYU01033717
483416
Bacteroidota
CTG
Gln
>WENV170043142
CDYU01029064
483416
Bacteroidota
CTG
Gln
>WENV170042258
CDYU01003372
483416
Bacteroidota
CTG
Gln
>WENV170043056
CDYU01025884
282712
Bacteroidota
TTT
Lys
>WENV170043308
CDYU01034734
398871
Bacteroidota
TTC
Glu
>WENV170043307
CDYU01034734
398871
Bacteroidota
TTC
Glu
>WENV170042746
CDYU01016220
201819
Bacteroidota
CAT
Met
>WENV170043789
CDYU01048505
56493
Bacteroidota
TGA
Ser
>WENV170042699
CDYU01015109
56493
Bacteroidota
TGA
Ser
>WENV170043407
CDYU01037448
175906
Bacteroidota
GTG
His
>WENV170043406
CDYU01037448
175906
Bacteroidota
GTG
His
>WENV170042470
CDYU01008452
175906
Bacteroidota
GTG
His
>WENV170042188
CDYU01000532
175903
Bacteroidota
GTG
His
>WENV170043338
CDYU01035650
118089
Bacteroidota
TAG
Leu
>WENV170042863
CDYU01019233
118089
Bacteroidota
TAG
Leu
>WENV170044121
CDYU01058429
398872
Bacteroidota
GGT
Thr
>WENV170043302
CDYU01034648
203954
Bacteroidota
GTC
Asp
>WENV170043510
CDYU01040151
178907
Bacteroidota
TCT
Arg
>WENV170042858
CDYU01019141
405877
Bacteroidota
GGT
Thr
>WENV170042440
CDYU01007865
29791
Bacteroidota
GCT
Ser
>WENV170043387
CDYU01037030
29791
Bacteroidota
GCT
Ser
>WENV170042367
CDYU01006174
182267
Bacteroidota
GTT
Asn
>WENV170042366
CDYU01006174
182267
Bacteroidota
GTT
Asn
>WENV170042365
CDYU01006174
182267
Bacteroidota
GTT
Asn
>WENV170043781
CDYU01048214
20449
Bacteroidota
GGA
Ser
>WENV170043419
CDYU01037867
20449
Bacteroidota
GGA
Ser
>WENV170042770
CDYU01017138
20449
Bacteroidota
GGA
Ser
>WENV170042596
CDYU01012561
20449
Bacteroidota
GGA
Ser
>WENV170043956
CDYU01053724
404663
Bacteroidota
GGT
Thr
>WENV170043383
CDYU01036902
21127
Bacteroidota
GGA
Ser
>WENV170042813
CDYU01017965
56072
Bacteroidota
TAA
Leu
>WENV170042621
CDYU01012994
57807
Bacteroidota
TGA
Ser
>WENV170042688
CDYU01014795
57807
Bacteroidota
TGA
Ser
>WENV170042736
CDYU01016204
57807
Bacteroidota
TGA
Ser
>WENV170042766
CDYU01017114
57807
Bacteroidota
TGA
Ser
>WENV170042986
CDYU01023510
57807
Bacteroidota
TGA
Ser
>WENV170042988
CDYU01023512
57807
Bacteroidota
TGA
Ser
>WENV170043443
CDYU01038745
57807
Bacteroidota
TGA
Ser
>WENV170043469
CDYU01039240
57807
Bacteroidota
TGA
Ser
>WENV170042418
CDYU01007066
175886
Bacteroidota
GGC
Ala
>WENV170044025
CDYU01055618
175902
Bacteroidota
GGC
Ala
>WENV170042968
CDYU01023060
175902
Bacteroidota
GGC
Ala
>WENV170043388
CDYU01037030
398860
Bacteroidota
CTC
Glu
>WENV170042441
CDYU01007865
398860
Bacteroidota
CTC
Glu
>WENV170043905
CDYU01052321
480404
Bacteroidota
TTG
Gln
>WENV170043674
CDYU01045508
280451
Bacteroidota
CGT
Thr
>WENV170043367
CDYU01036521
418894
Bacteroidota
TTC
Glu
>WENV170043228
CDYU01032468
418894
Bacteroidota
TTC
Glu
>WENV170043015
CDYU01024876
418894
Bacteroidota
TTC
Glu
>WENV170043014
CDYU01024876
418894
Bacteroidota
TTC
Glu
>WENV170042987
CDYU01023511
418894
Bacteroidota
TTC
Glu
>WENV170042824
CDYU01017986
99847
Bacteroidota
GTA
Tyr
>WENV170043050
CDYU01025539
99847
Bacteroidota
GTA
Tyr
>WENV170043310
CDYU01034735
99847
Bacteroidota
GTA
Tyr
>WENV170043860
CDYU01051361
99847
Bacteroidota
GTA
Tyr
>WENV170043143
CDYU01029066
399200
Bacteroidota
CAT
Met
>WENV170043144
CDYU01029066
399200
Bacteroidota
CAT
Met
>WENV170043508
CDYU01040150
399200
Bacteroidota
CAT
Met
>WENV170043590
CDYU01041970
399200
Bacteroidota
CAT
Met
>WENV170043827
CDYU01050047
186874
Bacteroidota
CAT
Met
>WENV170043373
CDYU01036521
186874
Bacteroidota
CAT
Met
>WENV170043193
CDYU01030797
186874
Bacteroidota
CAT
Met
>WENV170042290
CDYU01003887
186874
Bacteroidota
CAT
Met
>WENV170043752
CDYU01047297
189252
Bacteroidota
GGC
Ala
>WENV170042640
CDYU01013416
178179
Bacteroidota
GGC
Ala
>WENV170042687
CDYU01014787
488746
Bacteroidota
CTG
Gln
>WENV170043042
CDYU01025364
280478
Bacteroidota
GCC
Gly
>WENV170043099
CDYU01027285
280478
Bacteroidota
GCC
Gly
>WENV170043408
CDYU01037451
280478
Bacteroidota
GCC
Gly
>WENV170044011
CDYU01055104
280478
Bacteroidota
GCC
Gly
>WENV170042427
CDYU01007100
186108
Bacteroidota
GTT
Asn
>WENV170042197
CDYU01000700
175844
Bacteroidota
GGC
Ala
>WENV170042255
CDYU01003369
175844
Bacteroidota
GGC
Ala
>WENV170043325
CDYU01035219
175844
Bacteroidota
GGC
Ala
>WENV170042534
CDYU01010737
73011
Bacteroidota
CAA
Leu
>WENV170043957
CDYU01053724
280515
Bacteroidota
CCA
Trp
>WENV170043597
CDYU01042430
183889
Bacteroidota
GGC
Ala
>WENV170043218
CDYU01031641
183889
Bacteroidota
GGC
Ala
>WENV170042915
CDYU01021147
183889
Bacteroidota
GGC
Ala
>WENV170043057
CDYU01025901
158068
Bacteroidota
GGG
Pro
>WENV170042913
CDYU01021132
158068
Bacteroidota
GGG
Pro
>WENV170042856
CDYU01018955
158068
Bacteroidota
GGG
Pro
>WENV170042471
CDYU01008455
158068
Bacteroidota
GGG
Pro
>WENV170042291
CDYU01003888
158068
Bacteroidota
GGG
Pro
>WENV170044026
CDYU01055634
398828
Bacteroidota
CCG
Arg
>WENV170043301
CDYU01034570
398828
Bacteroidota
CCG
Arg
>WENV170042597
CDYU01012561
74084
Bacteroidota
CAG
Leu
>WENV170042768
CDYU01017138
74084
Bacteroidota
CAG
Leu
>WENV170043432
CDYU01038310
159415
Bacteroidota
TAC
Val
>WENV170043431
CDYU01038310
159415
Bacteroidota
TAC
Val
>WENV170042401
CDYU01006627
480325
Bacteroidota
CTG
Gln
>WENV170042400
CDYU01006627
480325
Bacteroidota
CTG
Gln
>WENV170042480
CDYU01008880
140771
Bacteroidota
>WENV170042477
CDYU01008880
140771
Bacteroidota
>WENV170042474
CDYU01008880
140771
Bacteroidota
>WENV170042383
CDYU01006250
140771
Bacteroidota
>WENV170042380
CDYU01006250
140771
Bacteroidota
>WENV170043951
CDYU01053347
176192
Bacteroidota
TCT
Arg
>WENV170043710
CDYU01046295
400088
Bacteroidota
GGT
Thr
>WENV170042472
CDYU01008455
280446
Bacteroidota
TTT
Lys
>WENV170043312
CDYU01034740
280446
Bacteroidota
TTT
Lys
>WENV170043705
CDYU01045889
280446
Bacteroidota
TTT
Lys
>WENV170043906
CDYU01052324
280446
Bacteroidota
TTT
Lys
>WENV170044117
CDYU01058422
280446
Bacteroidota
TTT
Lys
>WENV170044009
CDYU01055099
484496
Bacteroidota
TTG
Gln
>WENV170043426
CDYU01038195
484496
Bacteroidota
TTG
Gln
>WENV170043319
CDYU01034885
484496
Bacteroidota
TTG
Gln
>WENV170043296
CDYU01034254
484496
Bacteroidota
TTG
Gln
>WENV170043035
CDYU01024969
484496
Bacteroidota
TTG
Gln
>WENV170042703
CDYU01015266
484496
Bacteroidota
TTG
Gln
>WENV170043509
CDYU01040151
285750
Bacteroidota
CCC
Gly
>WENV170043227
CDYU01032463
285750
Bacteroidota
CCC
Gly
>WENV170043588
CDYU01041734
188555
Bacteroidota
CAT
Met
>WENV170043689
CDYU01045555
398836
Bacteroidota
GCA
Cys
>WENV170043636
CDYU01044099
398836
Bacteroidota
GCA
Cys
>WENV170042742
CDYU01016212
398836
Bacteroidota
GCA
Cys
>WENV170042524
CDYU01010210
398836
Bacteroidota
GCA
Cys
>WENV170042407
CDYU01006837
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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