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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170042446
CDYU01007989
204388
Verrucomicrobiota
CAT
Met
>WENV170043779
CDYU01048212
406043
Verrucomicrobiota
GCA
Cys
>WENV170042558
CDYU01011208
293125
Verrucomicrobiota
GAA
Phe
>WENV170043919
CDYU01052806
406350
Verrucomicrobiota
TGT
Thr
>WENV170042891
CDYU01020153
148006
Verrucomicrobiota
CAA
Leu
>WENV170043688
CDYU01045541
293105
Verrucomicrobiota
CAT
Met
>WENV170042907
CDYU01021121
405901
Verrucomicrobiota
GCC
Gly
>WENV170042887
CDYU01020147
483642
Verrucomicrobiota
CCC
Gly
>WENV170044060
CDYU01056934
157427
Verrucomicrobiota
GTC
Asp
>WENV170042702
CDYU01015260
157427
Verrucomicrobiota
GTC
Asp
>WENV170043065
CDYU01025969
293079
Verrucomicrobiota
CGC
Ala
>WENV170042236
CDYU01002400
120352
Verrucomicrobiota
TAG
Leu
>WENV170042888
CDYU01020147
489412
Verrucomicrobiota
TCC
Gly
>WENV170044098
CDYU01057953
293069
Verrucomicrobiota
CTT
Lys
>WENV170044097
CDYU01057953
293069
Verrucomicrobiota
CTT
Lys
>WENV170044096
CDYU01057953
293069
Verrucomicrobiota
CTT
Lys
>WENV170042213
CDYU01001465
293069
Verrucomicrobiota
CTT
Lys
>WENV170042212
CDYU01001465
293069
Verrucomicrobiota
CTT
Lys
>WENV170043277
CDYU01033832
406336
Verrucomicrobiota
CCT
Arg
>WENV170043513
CDYU01040165
406369
Verrucomicrobiota
CCG
Arg
>WENV170043740
CDYU01047275
406044
Verrucomicrobiota
CTG
Gln
>WENV170042557
CDYU01011208
187556
Verrucomicrobiota
GGG
Pro
>WENV170043687
CDYU01045541
406037
Verrucomicrobiota
GTG
His
>WENV170042216
CDYU01001540
406360
Verrucomicrobiota
GAC
Val
>WENV170043849
CDYU01050900
187548
Verrucomicrobiota
TCT
Arg
>WENV170044095
CDYU01057953
406040
Verrucomicrobiota
CGT
Thr
>WENV170042749
CDYU01016234
57652
Verrucomicrobiota
TGA
Ser
>WENV170044114
CDYU01058417
406368
Verrucomicrobiota
TTG
Gln
>WENV170042262
CDYU01003377
101461
Verrucomicrobiota
GTA
Tyr
>WENV170043633
CDYU01044090
293095
Verrucomicrobiota
TTT
Lys
>WENV170042794
CDYU01017152
187561
Verrucomicrobiota
CGG
Pro
>WENV170042906
CDYU01021121
406342
Verrucomicrobiota
CAT
Met
>WENV170042261
CDYU01003377
406351
Verrucomicrobiota
GTT
Asn
>WENV170044115
CDYU01058417
303305
Verrucomicrobiota
GGC
Ala
>WENV170042599
CDYU01012569
8938
Verrucomicrobiota
GCT
Ser
>WENV170042559
CDYU01011208
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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