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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
71 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170044186
CDYX01002021
99852
Bacillota
GTA
Tyr
>WENV170044341
CDYX01005487
343590
Bacillota
GCC
Gly
>WENV170044384
CDYX01006514
343590
Bacillota
GCC
Gly
>WENV170044212
CDYX01002732
349107
Bacillota
GCC
Gly
>WENV170044425
CDYX01007692
349107
Bacillota
GCC
Gly
>WENV170044526
CDYX01010049
349107
Bacillota
GCC
Gly
>WENV170045086
CDYX01028716
349107
Bacillota
GCC
Gly
>WENV170045554
CDYX01041549
349107
Bacillota
GCC
Gly
>WENV170044424
CDYX01007692
280428
Bacillota
GAA
Phe
>WENV170045085
CDYX01028716
280428
Bacillota
GAA
Phe
>WENV170045553
CDYX01041549
280428
Bacillota
GAA
Phe
>WENV170044527
CDYX01010049
280466
Bacillota
TAC
Val
>WENV170045476
CDYX01039679
280492
Bacillota
CTT
Lys
>WENV170044938
CDYX01024816
280492
Bacillota
CTT
Lys
>WENV170044772
CDYX01018237
280492
Bacillota
CTT
Lys
>WENV170044961
CDYX01025885
175842
Bacillota
CAC
Val
>WENV170045075
CDYX01028256
236579
Bacillota
GAT
Ile
>WENV170044710
CDYX01016450
406553
Bacillota
TTG
Gln
>WENV170045074
CDYX01028256
295166
Bacillota
TGC
Ala
>WENV170044667
CDYX01014632
215243
Bacillota
CAT
Met
>WENV170044892
CDYX01023084
190476
Bacillota
CAT
Met
>WENV170044427
CDYX01007733
73664
Bacillota
CAG
Leu
>WENV170044394
CDYX01006822
280447
Bacillota
GAC
Val
>WENV170045293
CDYX01034432
5692
Bacillota
GCT
Ser
>WENV170045368
CDYX01036973
175859
Bacillota
TCT
Arg
>WENV170044685
CDYX01015338
175859
Bacillota
TCT
Arg
>WENV170044141
CDYX01000602
290325
Bacillota
GCC
Gly
>WENV170045063
CDYX01027904
175831
Bacillota
ACG
Arg
>WENV170044894
CDYX01023090
187589
Bacillota
CAT
Met
>WENV170045150
CDYX01030480
284627
Bacillota
GAA
Phe
>WENV170045100
CDYX01029089
284627
Bacillota
GAA
Phe
>WENV170044162
CDYX01001377
295350
Bacillota
TGC
Ala
>WENV170045624
CDYX01043564
480322
Bacillota
CTG
Gln
>WENV170044952
CDYX01025522
175868
Bacillota
GTT
Asn
>WENV170044870
CDYX01022071
175868
Bacillota
GTT
Asn
>WENV170044834
CDYX01020577
175868
Bacillota
GTT
Asn
>WENV170044951
CDYX01025522
398854
Bacillota
CTC
Glu
>WENV170045247
CDYX01033128
291576
Bacillota
CCC
Gly
>WENV170044696
CDYX01015800
291576
Bacillota
CCC
Gly
>WENV170045525
CDYX01040657
175899
Bacillota
GTC
Asp
>WENV170044664
CDYX01014632
303718
Bacillota
TGT
Thr
>WENV170044417
CDYX01007439
303718
Bacillota
TGT
Thr
>WENV170045423
CDYX01038126
56079
Bacillota
AAG
Leu
>WENV170045422
CDYX01038126
56079
Bacillota
AAG
Leu
>WENV170045168
CDYX01030792
117745
Bacillota
GTA
Tyr
>WENV170045305
CDYX01034791
280444
Bacillota
GGT
Thr
>WENV170044898
CDYX01023468
46643
Bacillota
TGA
Ser
>WENV170045273
CDYX01033791
321753
Bacillota
GCC
Gly
>WENV170044663
CDYX01014632
321753
Bacillota
GCC
Gly
>WENV170044523
CDYX01009871
179755
Bacillota
CCG
Arg
>WENV170044158
CDYX01001345
179755
Bacillota
CCG
Arg
>WENV170044893
CDYX01023084
398832
Bacillota
TTC
Glu
>WENV170044532
CDYX01010125
398832
Bacillota
TTC
Glu
>WENV170045338
CDYX01035660
294275
Bacillota
TGC
Ala
>WENV170044513
CDYX01009742
280462
Bacillota
GAA
Phe
>WENV170045498
CDYX01040304
398852
Bacillota
CTC
Glu
>WENV170044983
CDYX01026308
398852
Bacillota
CTC
Glu
>WENV170044887
CDYX01023056
398852
Bacillota
CTC
Glu
>WENV170044835
CDYX01020609
398852
Bacillota
CTC
Glu
>WENV170044821
CDYX01019793
398852
Bacillota
CTC
Glu
>WENV170044739
CDYX01017853
398852
Bacillota
CTC
Glu
>WENV170044362
CDYX01005833
398852
Bacillota
CTC
Glu
>WENV170044724
CDYX01017264
280483
Bacillota
GAA
Phe
>WENV170044287
CDYX01004739
280483
Bacillota
GAA
Phe
>WENV170045263
CDYX01033668
175857
Bacillota
GTG
His
>WENV170044435
CDYX01007762
175857
Bacillota
GTG
His
>WENV170044725
CDYX01017264
285756
Bacillota
GCC
Gly
>WENV170044288
CDYX01004739
285756
Bacillota
GCC
Gly
>WENV170044205
CDYX01002435
285756
Bacillota
GCC
Gly
>WENV170045265
CDYX01033668
280463
Bacillota
TTT
Lys
>WENV170045292
CDYX01034432
56074
Bacillota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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