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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
115 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170044344
CDYX01005513
295385
Bacteroidota
CCA
Trp
>WENV170045537
CDYX01040942
285360
Bacteroidota
TTT
Lys
>WENV170045425
CDYX01038167
117741
Bacteroidota
TAG
Leu
>WENV170044866
CDYX01021784
398829
Bacteroidota
CCT
Arg
>WENV170045516
CDYX01040343
398829
Bacteroidota
CCT
Arg
>WENV170045513
CDYX01040343
175838
Bacteroidota
GTT
Asn
>WENV170045514
CDYX01040343
175838
Bacteroidota
GTT
Asn
>WENV170045515
CDYX01040343
175838
Bacteroidota
GTT
Asn
>WENV170045361
CDYX01036605
404226
Bacteroidota
CCT
Arg
>WENV170045599
CDYX01043109
175904
Bacteroidota
CGG
Pro
>WENV170045295
CDYX01034507
289031
Bacteroidota
CAT
Met
>WENV170045072
CDYX01028029
289031
Bacteroidota
CAT
Met
>WENV170044697
CDYX01015803
289031
Bacteroidota
CAT
Met
>WENV170044282
CDYX01004730
289031
Bacteroidota
CAT
Met
>WENV170044885
CDYX01022932
20492
Bacteroidota
GGA
Ser
>WENV170045531
CDYX01040683
20206
Bacteroidota
GGA
Ser
>WENV170045522
CDYX01040566
483416
Bacteroidota
CTG
Gln
>WENV170044660
CDYX01014360
483416
Bacteroidota
CTG
Gln
>WENV170044586
CDYX01012451
483416
Bacteroidota
CTG
Gln
>WENV170044274
CDYX01004382
483416
Bacteroidota
CTG
Gln
>WENV170045203
CDYX01031671
282712
Bacteroidota
TTT
Lys
>WENV170045310
CDYX01034864
201819
Bacteroidota
CAT
Met
>WENV170045309
CDYX01034864
201819
Bacteroidota
CAT
Met
>WENV170044869
CDYX01022064
56493
Bacteroidota
TGA
Ser
>WENV170044456
CDYX01008106
56493
Bacteroidota
TGA
Ser
>WENV170045088
CDYX01028726
175903
Bacteroidota
GTG
His
>WENV170044211
CDYX01002731
351598
Bacteroidota
CGG
Pro
>WENV170044409
CDYX01006909
351598
Bacteroidota
CGG
Pro
>WENV170044778
CDYX01018301
351598
Bacteroidota
CGG
Pro
>WENV170044803
CDYX01019115
351598
Bacteroidota
CGG
Pro
>WENV170045511
CDYX01040343
351598
Bacteroidota
CGG
Pro
>WENV170044360
CDYX01005821
118089
Bacteroidota
TAG
Leu
>WENV170044156
CDYX01001342
398872
Bacteroidota
GGT
Thr
>WENV170045585
CDYX01042763
203954
Bacteroidota
GTC
Asp
>WENV170044998
CDYX01026599
203954
Bacteroidota
GTC
Asp
>WENV170045555
CDYX01041604
405877
Bacteroidota
GGT
Thr
>WENV170045411
CDYX01037832
405877
Bacteroidota
GGT
Thr
>WENV170045379
CDYX01037344
405877
Bacteroidota
GGT
Thr
>WENV170045064
CDYX01027940
29791
Bacteroidota
GCT
Ser
>WENV170044950
CDYX01025275
182267
Bacteroidota
GTT
Asn
>WENV170044606
CDYX01012807
182267
Bacteroidota
GTT
Asn
>WENV170044605
CDYX01012807
182267
Bacteroidota
GTT
Asn
>WENV170044601
CDYX01012791
20449
Bacteroidota
GGA
Ser
>WENV170044700
CDYX01016131
21127
Bacteroidota
GGA
Ser
>WENV170044343
CDYX01005493
21127
Bacteroidota
GGA
Ser
>WENV170045506
CDYX01040343
56072
Bacteroidota
TAA
Leu
>WENV170045255
CDYX01033420
57807
Bacteroidota
TGA
Ser
>WENV170044524
CDYX01009872
57807
Bacteroidota
TGA
Ser
>WENV170044245
CDYX01003694
57807
Bacteroidota
TGA
Ser
>WENV170044243
CDYX01003694
57807
Bacteroidota
TGA
Ser
>WENV170044446
CDYX01008031
175886
Bacteroidota
GGC
Ala
>WENV170045549
CDYX01041296
175902
Bacteroidota
GGC
Ala
>WENV170044235
CDYX01003693
175902
Bacteroidota
GGC
Ala
>WENV170045394
CDYX01037425
179697
Bacteroidota
TGT
Thr
>WENV170045148
CDYX01030366
398860
Bacteroidota
CTC
Glu
>WENV170045065
CDYX01027940
398860
Bacteroidota
CTC
Glu
>WENV170045539
CDYX01040957
280451
Bacteroidota
CGT
Thr
>WENV170045352
CDYX01036584
418894
Bacteroidota
TTC
Glu
>WENV170045351
CDYX01036584
418894
Bacteroidota
TTC
Glu
>WENV170044959
CDYX01025568
418894
Bacteroidota
TTC
Glu
>WENV170045508
CDYX01040343
99847
Bacteroidota
GTA
Tyr
>WENV170045398
CDYX01037429
99847
Bacteroidota
GTA
Tyr
>WENV170045269
CDYX01033788
99847
Bacteroidota
GTA
Tyr
>WENV170044217
CDYX01002750
99847
Bacteroidota
GTA
Tyr
>WENV170045243
CDYX01032877
399200
Bacteroidota
CAT
Met
>WENV170045216
CDYX01032100
399200
Bacteroidota
CAT
Met
>WENV170045257
CDYX01033482
186874
Bacteroidota
CAT
Met
>WENV170045232
CDYX01032495
186874
Bacteroidota
CAT
Met
>WENV170044324
CDYX01005089
186874
Bacteroidota
CAT
Met
>WENV170045299
CDYX01034527
332896
Bacteroidota
TTT
Lys
>WENV170044275
CDYX01004384
332896
Bacteroidota
TTT
Lys
>WENV170045530
CDYX01040683
488746
Bacteroidota
CTG
Gln
>WENV170044954
CDYX01025564
280478
Bacteroidota
GCC
Gly
>WENV170044318
CDYX01005086
280478
Bacteroidota
GCC
Gly
>WENV170044320
CDYX01005086
280478
Bacteroidota
GCC
Gly
>WENV170044322
CDYX01005086
280478
Bacteroidota
GCC
Gly
>WENV170044323
CDYX01005086
280478
Bacteroidota
GCC
Gly
>WENV170044695
CDYX01015799
175844
Bacteroidota
GGC
Ala
>WENV170044132
CDYX01000370
175844
Bacteroidota
GGC
Ala
>WENV170044542
CDYX01010496
280515
Bacteroidota
CCA
Trp
>WENV170045083
CDYX01028672
183889
Bacteroidota
GGC
Ala
>WENV170044604
CDYX01012794
183889
Bacteroidota
GGC
Ala
>WENV170045532
CDYX01040683
158068
Bacteroidota
GGG
Pro
>WENV170045381
CDYX01037413
158068
Bacteroidota
GGG
Pro
>WENV170044560
CDYX01010792
158068
Bacteroidota
GGG
Pro
>WENV170044390
CDYX01006774
158068
Bacteroidota
GGG
Pro
>WENV170045538
CDYX01040957
398828
Bacteroidota
CCG
Arg
>WENV170045154
CDYX01030587
159415
Bacteroidota
TAC
Val
>WENV170045153
CDYX01030587
159415
Bacteroidota
TAC
Val
>WENV170044828
CDYX01020076
159415
Bacteroidota
TAC
Val
>WENV170044827
CDYX01020076
159415
Bacteroidota
TAC
Val
>WENV170044826
CDYX01020076
159415
Bacteroidota
TAC
Val
>WENV170045461
CDYX01039315
140771
Bacteroidota
>WENV170045458
CDYX01039315
140771
Bacteroidota
>WENV170044229
CDYX01003316
140771
Bacteroidota
>WENV170044226
CDYX01003316
140771
Bacteroidota
>WENV170044223
CDYX01003316
140771
Bacteroidota
>WENV170045209
CDYX01031720
176192
Bacteroidota
TCT
Arg
>WENV170045620
CDYX01043486
176192
Bacteroidota
TCT
Arg
>WENV170044599
CDYX01012791
400088
Bacteroidota
GGT
Thr
>WENV170045601
CDYX01043112
280446
Bacteroidota
TTT
Lys
>WENV170044991
CDYX01026322
280446
Bacteroidota
TTT
Lys
>WENV170044693
CDYX01015682
280446
Bacteroidota
TTT
Lys
>WENV170044662
CDYX01014630
280446
Bacteroidota
TTT
Lys
>WENV170044260
CDYX01004019
280446
Bacteroidota
TTT
Lys
>WENV170044215
CDYX01002750
280446
Bacteroidota
TTT
Lys
>WENV170045431
CDYX01038439
484496
Bacteroidota
TTG
Gln
>WENV170044719
CDYX01016971
484496
Bacteroidota
TTG
Gln
>WENV170044608
CDYX01012874
484496
Bacteroidota
TTG
Gln
>WENV170044595
CDYX01012767
484496
Bacteroidota
TTG
Gln
>WENV170045244
CDYX01032877
285750
Bacteroidota
CCC
Gly
>WENV170045603
CDYX01043112
398836
Bacteroidota
GCA
Cys
>WENV170045266
CDYX01033715
398836
Bacteroidota
GCA
Cys
>WENV170044484
CDYX01009088
398836
Bacteroidota
GCA
Cys
>WENV170044369
CDYX01006138
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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