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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
149 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170046893
CDYZ01004116
398829
Bacteroidota
CCT
Arg
>WENV170048007
CDYZ01065709
398829
Bacteroidota
CCT
Arg
>WENV170048112
CDYZ01071209
175838
Bacteroidota
GTT
Asn
>WENV170048113
CDYZ01071209
175838
Bacteroidota
GTT
Asn
>WENV170047520
CDYZ01036808
404226
Bacteroidota
CCT
Arg
>WENV170047908
CDYZ01061908
175904
Bacteroidota
CGG
Pro
>WENV170046994
CDYZ01008011
400161
Bacteroidota
GGT
Thr
>WENV170048063
CDYZ01068314
400161
Bacteroidota
GGT
Thr
>WENV170047792
CDYZ01055352
289031
Bacteroidota
CAT
Met
>WENV170047942
CDYZ01063245
156422
Bacteroidota
TAC
Val
>WENV170047763
CDYZ01054126
156422
Bacteroidota
TAC
Val
>WENV170047067
CDYZ01011514
156422
Bacteroidota
TAC
Val
>WENV170047066
CDYZ01011514
156422
Bacteroidota
TAC
Val
>WENV170047065
CDYZ01011514
156422
Bacteroidota
TAC
Val
>WENV170047029
CDYZ01009092
156422
Bacteroidota
TAC
Val
>WENV170047027
CDYZ01009092
156422
Bacteroidota
TAC
Val
>WENV170047888
CDYZ01060849
280553
Bacteroidota
TTT
Lys
>WENV170046961
CDYZ01006504
280557
Bacteroidota
CAT
Met
>WENV170048151
CDYZ01073006
20206
Bacteroidota
GGA
Ser
>WENV170047774
CDYZ01054704
201819
Bacteroidota
CAT
Met
>WENV170047165
CDYZ01016972
201819
Bacteroidota
CAT
Met
>WENV170047164
CDYZ01016972
201819
Bacteroidota
CAT
Met
>WENV170047440
CDYZ01033305
118221
Bacteroidota
CAA
Leu
>WENV170047245
CDYZ01020992
118221
Bacteroidota
CAA
Leu
>WENV170047122
CDYZ01015061
118221
Bacteroidota
CAA
Leu
>WENV170046859
CDYZ01001619
118221
Bacteroidota
CAA
Leu
>WENV170047902
CDYZ01061472
118221
Bacteroidota
CAA
Leu
>WENV170048066
CDYZ01068337
118221
Bacteroidota
CAA
Leu
>WENV170047787
CDYZ01055244
56493
Bacteroidota
TGA
Ser
>WENV170047630
CDYZ01045530
56493
Bacteroidota
TGA
Ser
>WENV170047099
CDYZ01013576
175906
Bacteroidota
GTG
His
>WENV170046860
CDYZ01001679
175906
Bacteroidota
GTG
His
>WENV170047843
CDYZ01058620
175903
Bacteroidota
GTG
His
>WENV170048050
CDYZ01067888
351598
Bacteroidota
CGG
Pro
>WENV170047653
CDYZ01046123
351598
Bacteroidota
CGG
Pro
>WENV170046976
CDYZ01007472
351598
Bacteroidota
CGG
Pro
>WENV170047503
CDYZ01036358
118089
Bacteroidota
TAG
Leu
>WENV170047313
CDYZ01026102
280530
Bacteroidota
CCA
Trp
>WENV170047574
CDYZ01041042
203954
Bacteroidota
GTC
Asp
>WENV170047057
CDYZ01011040
178907
Bacteroidota
TCT
Arg
>WENV170047549
CDYZ01039227
56385
Bacteroidota
TGA
Ser
>WENV170047379
CDYZ01029914
56385
Bacteroidota
TGA
Ser
>WENV170047378
CDYZ01029914
56385
Bacteroidota
TGA
Ser
>WENV170047374
CDYZ01029461
56385
Bacteroidota
TGA
Ser
>WENV170047244
CDYZ01020991
56385
Bacteroidota
TGA
Ser
>WENV170047060
CDYZ01011311
56385
Bacteroidota
TGA
Ser
>WENV170046877
CDYZ01003002
56385
Bacteroidota
TGA
Ser
>WENV170047768
CDYZ01054204
20449
Bacteroidota
GGA
Ser
>WENV170047548
CDYZ01039064
20449
Bacteroidota
GGA
Ser
>WENV170048064
CDYZ01068314
312035
Bacteroidota
CCA
Trp
>WENV170047785
CDYZ01055226
312035
Bacteroidota
CCA
Trp
>WENV170047721
CDYZ01051625
312035
Bacteroidota
CCA
Trp
>WENV170048041
CDYZ01067557
178133
Bacteroidota
GAT
Ile
>WENV170048075
CDYZ01069018
242241
Bacteroidota
GTC
Asp
>WENV170048074
CDYZ01069018
242241
Bacteroidota
GTC
Asp
>WENV170048073
CDYZ01069018
242241
Bacteroidota
GTC
Asp
>WENV170047773
CDYZ01054692
242241
Bacteroidota
GTC
Asp
>WENV170047772
CDYZ01054692
242241
Bacteroidota
GTC
Asp
>WENV170047771
CDYZ01054692
242241
Bacteroidota
GTC
Asp
>WENV170047736
CDYZ01052228
242241
Bacteroidota
GTC
Asp
>WENV170047544
CDYZ01038674
242241
Bacteroidota
GTC
Asp
>WENV170047543
CDYZ01038674
242241
Bacteroidota
GTC
Asp
>WENV170047542
CDYZ01038674
242241
Bacteroidota
GTC
Asp
>WENV170047541
CDYZ01038674
242241
Bacteroidota
GTC
Asp
>WENV170047512
CDYZ01036378
242241
Bacteroidota
GTC
Asp
>WENV170047511
CDYZ01036378
242241
Bacteroidota
GTC
Asp
>WENV170047507
CDYZ01036368
242241
Bacteroidota
GTC
Asp
>WENV170047506
CDYZ01036368
242241
Bacteroidota
GTC
Asp
>WENV170047505
CDYZ01036368
242241
Bacteroidota
GTC
Asp
>WENV170047479
CDYZ01035033
242241
Bacteroidota
GTC
Asp
>WENV170047478
CDYZ01035033
242241
Bacteroidota
GTC
Asp
>WENV170047086
CDYZ01012737
242241
Bacteroidota
GTC
Asp
>WENV170047085
CDYZ01012737
242241
Bacteroidota
GTC
Asp
>WENV170047084
CDYZ01012737
242241
Bacteroidota
GTC
Asp
>WENV170047083
CDYZ01012737
242241
Bacteroidota
GTC
Asp
>WENV170047990
CDYZ01064989
21127
Bacteroidota
GGA
Ser
>WENV170047707
CDYZ01050577
56072
Bacteroidota
TAA
Leu
>WENV170047273
CDYZ01023106
175944
Bacteroidota
CAT
Met
>WENV170047660
CDYZ01046577
175944
Bacteroidota
CAT
Met
>WENV170047220
CDYZ01019841
175886
Bacteroidota
GGC
Ala
>WENV170047257
CDYZ01021642
175902
Bacteroidota
GGC
Ala
>WENV170047578
CDYZ01041048
179697
Bacteroidota
TGT
Thr
>WENV170046883
CDYZ01003582
156128
Bacteroidota
GGG
Pro
>WENV170047976
CDYZ01064406
280451
Bacteroidota
CGT
Thr
>WENV170047306
CDYZ01025853
280451
Bacteroidota
CGT
Thr
>WENV170047211
CDYZ01019299
280451
Bacteroidota
CGT
Thr
>WENV170048045
CDYZ01067625
418894
Bacteroidota
TTC
Glu
>WENV170048044
CDYZ01067625
418894
Bacteroidota
TTC
Glu
>WENV170047375
CDYZ01029552
418894
Bacteroidota
TTC
Glu
>WENV170048110
CDYZ01071209
99847
Bacteroidota
GTA
Tyr
>WENV170047728
CDYZ01051833
99847
Bacteroidota
GTA
Tyr
>WENV170046869
CDYZ01002435
99847
Bacteroidota
GTA
Tyr
>WENV170048048
CDYZ01067719
399200
Bacteroidota
CAT
Met
>WENV170047846
CDYZ01058631
404109
Bacteroidota
CTC
Glu
>WENV170047845
CDYZ01058631
404109
Bacteroidota
CTC
Glu
>WENV170047315
CDYZ01026452
404109
Bacteroidota
CTC
Glu
>WENV170047314
CDYZ01026452
404109
Bacteroidota
CTC
Glu
>WENV170047297
CDYZ01024753
404109
Bacteroidota
CTC
Glu
>WENV170047157
CDYZ01016540
404109
Bacteroidota
CTC
Glu
>WENV170047156
CDYZ01016540
404109
Bacteroidota
CTC
Glu
>WENV170046957
CDYZ01006401
404109
Bacteroidota
CTC
Glu
>WENV170046956
CDYZ01006401
404109
Bacteroidota
CTC
Glu
>WENV170047847
CDYZ01058631
404109
Bacteroidota
CTC
Glu
>WENV170048115
CDYZ01071234
404109
Bacteroidota
CTC
Glu
>WENV170048117
CDYZ01071234
404109
Bacteroidota
CTC
Glu
>WENV170048051
CDYZ01067900
186874
Bacteroidota
CAT
Met
>WENV170047145
CDYZ01016112
186874
Bacteroidota
CAT
Met
>WENV170047702
CDYZ01050244
46648
Bacteroidota
TAA
Leu
>WENV170047434
CDYZ01032777
46648
Bacteroidota
TAA
Leu
>WENV170047250
CDYZ01021053
46648
Bacteroidota
TAA
Leu
>WENV170046991
CDYZ01008008
46648
Bacteroidota
TAA
Leu
>WENV170046886
CDYZ01003624
46648
Bacteroidota
TAA
Leu
>WENV170047357
CDYZ01028878
488746
Bacteroidota
CTG
Gln
>WENV170047101
CDYZ01013864
488746
Bacteroidota
CTG
Gln
>WENV170046935
CDYZ01005895
118432
Bacteroidota
CAG
Leu
>WENV170047295
CDYZ01024302
280478
Bacteroidota
GCC
Gly
>WENV170048004
CDYZ01065521
27524
Bacteroidota
GGA
Ser
>WENV170047664
CDYZ01047015
186108
Bacteroidota
GTT
Asn
>WENV170047890
CDYZ01060946
280515
Bacteroidota
CCA
Trp
>WENV170048070
CDYZ01068683
183889
Bacteroidota
GGC
Ala
>WENV170048060
CDYZ01068312
183889
Bacteroidota
GGC
Ala
>WENV170047866
CDYZ01059369
178134
Bacteroidota
TGG
Pro
>WENV170047865
CDYZ01059369
178134
Bacteroidota
TGG
Pro
>WENV170047864
CDYZ01059369
178134
Bacteroidota
TGG
Pro
>WENV170047061
CDYZ01011347
178134
Bacteroidota
TGG
Pro
>WENV170046855
CDYZ01001181
186142
Bacteroidota
GAT
Ile
>WENV170047383
CDYZ01030645
398828
Bacteroidota
CCG
Arg
>WENV170046968
CDYZ01006888
398828
Bacteroidota
CCG
Arg
>WENV170047629
CDYZ01045529
191205
Bacteroidota
TGG
Pro
>WENV170047628
CDYZ01045529
191205
Bacteroidota
TGG
Pro
>WENV170047258
CDYZ01021978
74084
Bacteroidota
CAG
Leu
>WENV170047581
CDYZ01041261
480325
Bacteroidota
CTG
Gln
>WENV170047525
CDYZ01037039
140771
Bacteroidota
>WENV170048122
CDYZ01071690
481328
Bacteroidota
TTG
Gln
>WENV170047100
CDYZ01013857
481328
Bacteroidota
TTG
Gln
>WENV170046923
CDYZ01005885
481328
Bacteroidota
TTG
Gln
>WENV170047608
CDYZ01043294
491385
Bacteroidota
TTG
Gln
>WENV170046981
CDYZ01007479
69204
Bacteroidota
TGA
Ser
>WENV170047716
CDYZ01051069
280446
Bacteroidota
TTT
Lys
>WENV170046904
CDYZ01005238
484496
Bacteroidota
TTG
Gln
>WENV170048037
CDYZ01067164
27502
Bacteroidota
GGA
Ser
>WENV170047147
CDYZ01016180
27502
Bacteroidota
GGA
Ser
>WENV170047916
CDYZ01062290
285750
Bacteroidota
CCC
Gly
>WENV170047238
CDYZ01020494
285750
Bacteroidota
CCC
Gly
>WENV170046856
CDYZ01001181
186143
Bacteroidota
TGC
Ala
>WENV170047782
CDYZ01055083
365112
Bacteroidota
TTT
Lys
>WENV170047984
CDYZ01064423
170323
Bacteroidota
GGG
Pro
>WENV170047875
CDYZ01060205
170323
Bacteroidota
GGG
Pro
>WENV170047358
CDYZ01028878
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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