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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170048535
CDZA01018685
280500
Bacillota
TGC
Ala
>WENV170048517
CDZA01018134
229015
Bacillota
GTG
His
>WENV170048609
CDZA01021225
229015
Bacillota
GTG
His
>WENV170049107
CDZA01045899
179917
Bacillota
CAT
Met
>WENV170049654
CDZA01074034
287289
Bacillota
GCC
Gly
>WENV170048677
CDZA01024323
236579
Bacillota
GAT
Ile
>WENV170049444
CDZA01062782
179563
Bacillota
GAT
Ile
>WENV170048787
CDZA01030163
184687
Bacillota
CAT
Met
>WENV170048405
CDZA01011781
73664
Bacillota
CAG
Leu
>WENV170049679
CDZA01075807
280447
Bacillota
GAC
Val
>WENV170048481
CDZA01016202
312274
Bacillota
GGC
Ala
>WENV170048204
CDZA01002003
284723
Bacillota
TAC
Val
>WENV170049104
CDZA01045899
284723
Bacillota
TAC
Val
>WENV170049033
CDZA01042486
189473
Bacillota
GAT
Ile
>WENV170049077
CDZA01044904
175859
Bacillota
TCT
Arg
>WENV170048948
CDZA01038473
175859
Bacillota
TCT
Arg
>WENV170049293
CDZA01054797
175831
Bacillota
ACG
Arg
>WENV170048478
CDZA01016155
175831
Bacillota
ACG
Arg
>WENV170049443
CDZA01062782
353153
Bacillota
TGC
Ala
>WENV170048608
CDZA01021225
179810
Bacillota
TCT
Arg
>WENV170049082
CDZA01045013
295350
Bacillota
TGC
Ala
>WENV170049553
CDZA01069422
480324
Bacillota
TTG
Gln
>WENV170049531
CDZA01067722
303718
Bacillota
TGT
Thr
>WENV170049111
CDZA01045982
303718
Bacillota
TGT
Thr
>WENV170048700
CDZA01025826
303718
Bacillota
TGT
Thr
>WENV170048593
CDZA01021150
186051
Bacillota
GAT
Ile
>WENV170048854
CDZA01033149
280444
Bacillota
GGT
Thr
>WENV170048337
CDZA01007502
280444
Bacillota
GGT
Thr
>WENV170049316
CDZA01056034
317482
Bacillota
TAC
Val
>WENV170048456
CDZA01015067
342104
Bacillota
TAC
Val
>WENV170049093
CDZA01045185
321753
Bacillota
GCC
Gly
>WENV170048286
CDZA01005783
321753
Bacillota
GCC
Gly
>WENV170048477
CDZA01016150
398832
Bacillota
TTC
Glu
>WENV170048676
CDZA01024323
294275
Bacillota
TGC
Ala
>WENV170049441
CDZA01062766
201856
Bacillota
GAT
Ile
>WENV170049265
CDZA01053568
56074
Bacillota
TGA
Ser
>WENV170048165
CDZA01000341
56074
Bacillota
TGA
Ser
>WENV170048401
CDZA01011645
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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