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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
172 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170051945
CDZC01005069
295385
Bacteroidota
CCA
Trp
>WENV170052396
CDZC01017393
295385
Bacteroidota
CCA
Trp
>WENV170052090
CDZC01009038
285360
Bacteroidota
TTT
Lys
>WENV170052961
CDZC01033021
117741
Bacteroidota
TAG
Leu
>WENV170051808
CDZC01000001
398829
Bacteroidota
CCT
Arg
>WENV170052662
CDZC01023843
398829
Bacteroidota
CCT
Arg
>WENV170051946
CDZC01005069
175838
Bacteroidota
GTT
Asn
>WENV170051947
CDZC01005069
175838
Bacteroidota
GTT
Asn
>WENV170052588
CDZC01022340
404226
Bacteroidota
CCT
Arg
>WENV170052622
CDZC01022925
175904
Bacteroidota
CGG
Pro
>WENV170052536
CDZC01020971
175904
Bacteroidota
CGG
Pro
>WENV170052760
CDZC01027596
289031
Bacteroidota
CAT
Met
>WENV170052068
CDZC01008428
289031
Bacteroidota
CAT
Met
>WENV170052952
CDZC01032736
280553
Bacteroidota
TTT
Lys
>WENV170052037
CDZC01007303
280557
Bacteroidota
CAT
Met
>WENV170052600
CDZC01022625
20492
Bacteroidota
GGA
Ser
>WENV170052125
CDZC01009828
20492
Bacteroidota
GGA
Ser
>WENV170052243
CDZC01013492
20206
Bacteroidota
GGA
Ser
>WENV170052857
CDZC01030807
483416
Bacteroidota
CTG
Gln
>WENV170052704
CDZC01025735
483416
Bacteroidota
CTG
Gln
>WENV170052440
CDZC01018463
282712
Bacteroidota
TTT
Lys
>WENV170051832
CDZC01000840
398871
Bacteroidota
TTC
Glu
>WENV170051831
CDZC01000840
398871
Bacteroidota
TTC
Glu
>WENV170052963
CDZC01033021
201819
Bacteroidota
CAT
Met
>WENV170052962
CDZC01033021
201819
Bacteroidota
CAT
Met
>WENV170052657
CDZC01023795
56493
Bacteroidota
TGA
Ser
>WENV170052263
CDZC01013782
56493
Bacteroidota
TGA
Ser
>WENV170052965
CDZC01033022
56493
Bacteroidota
TGA
Ser
>WENV170052161
CDZC01010847
175906
Bacteroidota
GTG
His
>WENV170052160
CDZC01010847
175906
Bacteroidota
GTG
His
>WENV170052455
CDZC01018708
175903
Bacteroidota
GTG
His
>WENV170052864
CDZC01031022
351598
Bacteroidota
CGG
Pro
>WENV170052405
CDZC01017897
351598
Bacteroidota
CGG
Pro
>WENV170052347
CDZC01016003
351598
Bacteroidota
CGG
Pro
>WENV170052277
CDZC01014381
351598
Bacteroidota
CGG
Pro
>WENV170052196
CDZC01011981
351598
Bacteroidota
CGG
Pro
>WENV170052070
CDZC01008492
351598
Bacteroidota
CGG
Pro
>WENV170052897
CDZC01031888
118089
Bacteroidota
TAG
Leu
>WENV170052481
CDZC01019207
398872
Bacteroidota
GGT
Thr
>WENV170052398
CDZC01017646
398872
Bacteroidota
GGT
Thr
>WENV170052537
CDZC01020971
280530
Bacteroidota
CCA
Trp
>WENV170052104
CDZC01009492
280530
Bacteroidota
CCA
Trp
>WENV170052449
CDZC01018467
203954
Bacteroidota
GTC
Asp
>WENV170052204
CDZC01011984
203954
Bacteroidota
GTC
Asp
>WENV170051833
CDZC01000841
178907
Bacteroidota
TCT
Arg
>WENV170052986
CDZC01033578
405877
Bacteroidota
GGT
Thr
>WENV170052940
CDZC01032430
405877
Bacteroidota
GGT
Thr
>WENV170052758
CDZC01027581
405877
Bacteroidota
GGT
Thr
>WENV170052874
CDZC01031323
29791
Bacteroidota
GCT
Ser
>WENV170052839
CDZC01030509
29791
Bacteroidota
GCT
Ser
>WENV170052738
CDZC01027062
29791
Bacteroidota
GCT
Ser
>WENV170052567
CDZC01021678
29791
Bacteroidota
GCT
Ser
>WENV170051810
CDZC01000016
29791
Bacteroidota
GCT
Ser
>WENV170052869
CDZC01031024
182267
Bacteroidota
GTT
Asn
>WENV170052868
CDZC01031024
182267
Bacteroidota
GTT
Asn
>WENV170052867
CDZC01031024
182267
Bacteroidota
GTT
Asn
>WENV170052233
CDZC01013233
182267
Bacteroidota
GTT
Asn
>WENV170052232
CDZC01013233
182267
Bacteroidota
GTT
Asn
>WENV170052231
CDZC01013233
182267
Bacteroidota
GTT
Asn
>WENV170052941
CDZC01032434
20449
Bacteroidota
GGA
Ser
>WENV170052613
CDZC01022637
20449
Bacteroidota
GGA
Ser
>WENV170051894
CDZC01002583
20449
Bacteroidota
GGA
Ser
>WENV170052352
CDZC01016263
21127
Bacteroidota
GGA
Ser
>WENV170052199
CDZC01011983
56072
Bacteroidota
TAA
Leu
>WENV170052832
CDZC01030505
175886
Bacteroidota
GGC
Ala
>WENV170052696
CDZC01025408
175902
Bacteroidota
GGC
Ala
>WENV170052636
CDZC01023368
175902
Bacteroidota
GGC
Ala
>WENV170052373
CDZC01016546
175902
Bacteroidota
GGC
Ala
>WENV170052720
CDZC01026457
179697
Bacteroidota
TGT
Thr
>WENV170052840
CDZC01030509
398860
Bacteroidota
CTC
Glu
>WENV170052739
CDZC01027062
398860
Bacteroidota
CTC
Glu
>WENV170052568
CDZC01021678
398860
Bacteroidota
CTC
Glu
>WENV170051811
CDZC01000016
398860
Bacteroidota
CTC
Glu
>WENV170052462
CDZC01018821
280451
Bacteroidota
CGT
Thr
>WENV170052280
CDZC01014389
418894
Bacteroidota
TTC
Glu
>WENV170052279
CDZC01014389
418894
Bacteroidota
TTC
Glu
>WENV170051827
CDZC01000567
418894
Bacteroidota
TTC
Glu
>WENV170052836
CDZC01030508
99847
Bacteroidota
GTA
Tyr
>WENV170052337
CDZC01015710
99847
Bacteroidota
GTA
Tyr
>WENV170052135
CDZC01010177
99847
Bacteroidota
GTA
Tyr
>WENV170051943
CDZC01005069
99847
Bacteroidota
GTA
Tyr
>WENV170051902
CDZC01002847
99847
Bacteroidota
GTA
Tyr
>WENV170051830
CDZC01000728
99847
Bacteroidota
GTA
Tyr
>WENV170052421
CDZC01018176
399200
Bacteroidota
CAT
Met
>WENV170052217
CDZC01012476
399200
Bacteroidota
CAT
Met
>WENV170052216
CDZC01012476
399200
Bacteroidota
CAT
Met
>WENV170052205
CDZC01011987
399200
Bacteroidota
CAT
Met
>WENV170052172
CDZC01011137
186874
Bacteroidota
CAT
Met
>WENV170052242
CDZC01013492
488746
Bacteroidota
CTG
Gln
>WENV170052261
CDZC01013770
280478
Bacteroidota
GCC
Gly
>WENV170052259
CDZC01013770
280478
Bacteroidota
GCC
Gly
>WENV170052257
CDZC01013770
280478
Bacteroidota
GCC
Gly
>WENV170052122
CDZC01009819
280478
Bacteroidota
GCC
Gly
>WENV170052120
CDZC01009819
280478
Bacteroidota
GCC
Gly
>WENV170052262
CDZC01013770
280478
Bacteroidota
GCC
Gly
>WENV170052556
CDZC01021330
280478
Bacteroidota
GCC
Gly
>WENV170052937
CDZC01032422
280478
Bacteroidota
GCC
Gly
>WENV170052856
CDZC01030802
27524
Bacteroidota
GGA
Ser
>WENV170052191
CDZC01011795
186108
Bacteroidota
GTT
Asn
>WENV170052190
CDZC01011795
186108
Bacteroidota
GTT
Asn
>WENV170052766
CDZC01027863
175844
Bacteroidota
GGC
Ala
>WENV170051836
CDZC01000843
175844
Bacteroidota
GGC
Ala
>WENV170052975
CDZC01033278
73011
Bacteroidota
CAA
Leu
>WENV170052709
CDZC01025935
280515
Bacteroidota
CCA
Trp
>WENV170052461
CDZC01018821
398828
Bacteroidota
CCG
Arg
>WENV170052947
CDZC01032724
74084
Bacteroidota
CAG
Leu
>WENV170052329
CDZC01015706
74084
Bacteroidota
CAG
Leu
>WENV170052902
CDZC01031889
159415
Bacteroidota
TAC
Val
>WENV170052901
CDZC01031889
159415
Bacteroidota
TAC
Val
>WENV170052900
CDZC01031889
159415
Bacteroidota
TAC
Val
>WENV170052152
CDZC01010605
159415
Bacteroidota
TAC
Val
>WENV170052151
CDZC01010605
159415
Bacteroidota
TAC
Val
>WENV170052150
CDZC01010605
159415
Bacteroidota
TAC
Val
>WENV170052291
CDZC01014652
480325
Bacteroidota
CTG
Gln
>WENV170052290
CDZC01014652
480325
Bacteroidota
CTG
Gln
>WENV170052611
CDZC01022631
140771
Bacteroidota
>WENV170052608
CDZC01022631
140771
Bacteroidota
>WENV170052605
CDZC01022631
140771
Bacteroidota
>WENV170052054
CDZC01007986
140771
Bacteroidota
>WENV170052741
CDZC01027063
176192
Bacteroidota
TCT
Arg
>WENV170052651
CDZC01023774
176192
Bacteroidota
TCT
Arg
>WENV170052583
CDZC01022338
176192
Bacteroidota
TCT
Arg
>WENV170051824
CDZC01000566
176192
Bacteroidota
TCT
Arg
>WENV170051892
CDZC01002583
400088
Bacteroidota
GGT
Thr
>WENV170051904
CDZC01002875
69204
Bacteroidota
TGA
Ser
>WENV170051906
CDZC01002875
69204
Bacteroidota
TGA
Ser
>WENV170052223
CDZC01012781
69204
Bacteroidota
TGA
Ser
>WENV170052635
CDZC01023255
69204
Bacteroidota
TGA
Ser
>WENV170052833
CDZC01030508
69204
Bacteroidota
TGA
Ser
>WENV170052855
CDZC01030802
69204
Bacteroidota
TGA
Ser
>WENV170052880
CDZC01031383
69204
Bacteroidota
TGA
Ser
>WENV170052966
CDZC01033022
69204
Bacteroidota
TGA
Ser
>WENV170052835
CDZC01030508
280446
Bacteroidota
TTT
Lys
>WENV170052574
CDZC01021854
280446
Bacteroidota
TTT
Lys
>WENV170052285
CDZC01014649
280446
Bacteroidota
TTT
Lys
>WENV170051998
CDZC01006152
280446
Bacteroidota
TTT
Lys
>WENV170052959
CDZC01033008
484496
Bacteroidota
TTG
Gln
>WENV170052787
CDZC01028189
484496
Bacteroidota
TTG
Gln
>WENV170052716
CDZC01026161
484496
Bacteroidota
TTG
Gln
>WENV170052531
CDZC01020966
484496
Bacteroidota
TTG
Gln
>WENV170052197
CDZC01011983
484496
Bacteroidota
TTG
Gln
>WENV170052149
CDZC01010598
484496
Bacteroidota
TTG
Gln
>WENV170051935
CDZC01004310
484496
Bacteroidota
TTG
Gln
>WENV170052520
CDZC01020622
27502
Bacteroidota
GGA
Ser
>WENV170052456
CDZC01018708
27502
Bacteroidota
GGA
Ser
>WENV170051905
CDZC01002875
27502
Bacteroidota
GGA
Ser
>WENV170052226
CDZC01013049
285750
Bacteroidota
CCC
Gly
>WENV170052218
CDZC01012476
285750
Bacteroidota
CCC
Gly
>WENV170051963
CDZC01005280
373714
Bacteroidota
GCC
Gly
>WENV170051962
CDZC01005280
373714
Bacteroidota
GCC
Gly
>WENV170051921
CDZC01003499
373714
Bacteroidota
GCC
Gly
>WENV170052663
CDZC01024039
186143
Bacteroidota
TGC
Ala
>WENV170052950
CDZC01032727
365112
Bacteroidota
TTT
Lys
>WENV170052838
CDZC01030509
365112
Bacteroidota
TTT
Lys
>WENV170052818
CDZC01029803
365112
Bacteroidota
TTT
Lys
>WENV170052680
CDZC01024919
365112
Bacteroidota
TTT
Lys
>WENV170052511
CDZC01020203
365112
Bacteroidota
TTT
Lys
>WENV170052444
CDZC01018465
365112
Bacteroidota
TTT
Lys
>WENV170052441
CDZC01018464
365112
Bacteroidota
TTT
Lys
>WENV170051969
CDZC01005359
365112
Bacteroidota
TTT
Lys
>WENV170051837
CDZC01000843
398836
Bacteroidota
GCA
Cys
>WENV170051883
CDZC01002336
398836
Bacteroidota
GCA
Cys
>WENV170051978
CDZC01005569
398836
Bacteroidota
GCA
Cys
>WENV170052127
CDZC01010054
398836
Bacteroidota
GCA
Cys
>WENV170052581
CDZC01022304
398836
Bacteroidota
GCA
Cys
>WENV170052752
CDZC01027575
398836
Bacteroidota
GCA
Cys
>WENV170052808
CDZC01029163
398836
Bacteroidota
GCA
Cys
>WENV170052987
CDZC01033578
170323
Bacteroidota
GGG
Pro
>WENV170052698
CDZC01025647
170323
Bacteroidota
GGG
Pro
>WENV170052244
CDZC01013492
170323
Bacteroidota
GGG
Pro
>WENV170052065
CDZC01008237
170323
Bacteroidota
GGG
Pro
>WENV170051870
CDZC01001606
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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